Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01403 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.5e-186 657.9 1232 100.0
Eucgr.C01339 Eucalyptus grandis HOM05D010218 ORTHO05D191294 6.0e-42 177.6 222 90.5
Eucgr.C01408 Eucalyptus grandis HOM05D010218 ORTHO05D007072 4.6e-34 151.4 81 91.4
Eucgr.C01424 Eucalyptus grandis HOM05D000467 ORTHO05D000379 1.3e-28 133.3 81 82.7
Eucgr.H02669 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.7e-28 132.9 81 81.5
Eucgr.C01365 Eucalyptus grandis HOM05D010218 ORTHO05D192280 3.6e-26 125.2 321 77.6
Eucgr.C01436 Eucalyptus grandis HOM05D010218 ORTHO05D007072 3.7e-23 115.2 81 71.6
Eucgr.C00054 Eucalyptus grandis HOM05D010218 ORTHO05D007072 8.2e-23 114.0 81 70.4
Eucgr.C01345 Eucalyptus grandis HOM05D010218 ORTHO05D007072 4.1e-22 111.7 81 71.6
Eucgr.C01429 Eucalyptus grandis HOM05D000467 ORTHO05D007072 2.9e-20 105.5 105 56.2
Eucgr.J00028 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.8e-20 105.1 81 66.7
Eucgr.L00927 Eucalyptus grandis HOM05D010218 ORTHO05D007072 3.8e-20 105.1 81 66.7
Eucgr.C01367 Eucalyptus grandis HOM05D010218 ORTHO05D007072 6.5e-20 104.4 112 77.7
Eucgr.E03501 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.5e-20 104.0 81 64.2
Eucgr.C01431 Eucalyptus grandis HOM05D000467 ORTHO05D000379 1.4e-19 103.2 56 91.1
Eucgr.E03529 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.9e-19 102.8 72 72.2
Eucgr.L01097 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-18 99.0 74 66.2
Eucgr.C01597 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.9e-17 95.1 80 58.8
Eucgr.C01443 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.1e-16 93.6 73 63.0
Eucgr.C01355 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.3e-15 90.1 81 63.0
Eucgr.C01600 Eucalyptus grandis HOM05D000005 ORTHO05D000294 1.7e-15 89.7 69 65.2
Eucgr.C01433 Eucalyptus grandis HOM05D000467 ORTHO05D000379 3.7e-15 88.6 52 84.6
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 5.3e-14 84.7 76 53.9
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-13 83.6 76 55.3
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-13 81.3 76 53.9
Eucgr.C00427 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.7e-13 80.9 80 48.8
Eucgr.F04310 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.7e-13 80.9 74 54.1
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 7.7e-13 80.9 78 51.3
Eucgr.C01700 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.3e-12 80.1 61 68.9
Eucgr.C00467 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.8e-12 78.6 79 50.6
Eucgr.C02630 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.8e-12 78.6 74 52.7
Eucgr.K01432 Eucalyptus grandis HOM05D010218 ORTHO05D007072 3.8e-12 78.6 75 58.7
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 3.8e-12 78.6 76 51.3
Eucgr.C01486 Eucalyptus grandis HOM05D016032 ORTHO05D007072 8.5e-12 77.4 80 46.2
Eucgr.C01693 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.5e-12 77.4 94 47.9
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 8.5e-12 77.4 75 52.0
Eucgr.C00318 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.1e-11 77.0 81 48.1
PGR142G2685 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-11 77.0 77 48.1
Prupe.8G031800 Prunus persica HOM05D000005 ORTHO05D000012 1.4e-11 76.6 79 48.1
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 1.9e-11 76.3 76 48.7
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 4.2e-11 75.1 76 51.3
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 4.2e-11 75.1 75 50.7
Eucgr.C00572 Eucalyptus grandis HOM05D016032 ORTHO05D007072 7.2e-11 74.3 81 48.1
Eucgr.E01860 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.2e-11 74.3 72 52.8
Eucgr.C04271 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.4e-11 73.9 74 48.6
Eucgr.E01836 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.4e-11 73.9 72 50.0
Eucgr.L01460 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.2e-10 73.6 74 47.3
PGR142G0579 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-10 73.6 75 49.3
Eucgr.C02041 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.6e-10 73.2 80 50.0
Eucgr.C02633 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.1e-10 72.8 73 50.7
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 2.1e-10 72.8 76 47.4
Eucgr.D02396 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-10 72.4 72 51.4
Eucgr.E01852 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-10 72.4 72 51.4
Eucgr.E01865 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-10 72.4 72 51.4
Eucgr.C00330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.6e-10 72.0 79 46.8
Eucgr.C01492 Eucalyptus grandis HOM05D000005 ORTHO05D007073 3.6e-10 72.0 80 51.2
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-10 72.0 77 48.1
Eucgr.C03318 Eucalyptus grandis HOM05D000467 ORTHO05D000379 4.7e-10 71.6 50 76.0
Eucgr.H03723 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.1e-10 71.2 78 48.7
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 6.1e-10 71.2 74 48.6
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 6.1e-10 71.2 76 47.4
PGR142G2372 Punica granatum HOM05D000005 ORTHO05D000012 6.1e-10 71.2 78 47.4
Eucgr.E01863 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.9e-10 70.9 72 50.0
PGR042G3770 Punica granatum HOM05D000005 ORTHO05D000012 7.9e-10 70.9 78 47.4
Eucgr.B01065 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.0e-09 70.5 74 50.0
Eucgr.E01797 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.0e-09 70.5 72 50.0
Eucgr.C02628 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.4e-09 70.1 73 49.3
Eucgr.H02212 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.4e-09 70.1 74 44.6
Eucgr.K01874 Eucalyptus grandis HOM05D016032 ORTHO05D007072 1.4e-09 70.1 81 45.7
Eucgr.E01810 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.3e-09 69.3 72 50.0
Eucgr.H03746 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.3e-09 69.3 77 48.1
PGR142G2658 Punica granatum HOM05D000005 ORTHO05D007072 2.3e-09 69.3 75 48.0
Eucgr.G00362 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.0e-09 68.9 80 47.5
Eucgr.C04267 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.9e-09 68.6 73 43.8
Eucgr.G00358 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.9e-09 68.6 77 46.8
Eucgr.C00276 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.7e-09 67.8 79 44.3
Eucgr.C02044 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.7e-09 67.8 71 50.7
Eucgr.C02641 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.7e-09 67.8 73 47.9
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.7e-09 67.8 78 44.9
Eucgr.J01320 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.7e-09 67.8 76 46.1
Eucgr.J01301 Eucalyptus grandis HOM05D000005 ORTHO05D007073 8.8e-09 67.4 72 47.2
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-08 67.0 72 48.6
Eucgr.C01354 Eucalyptus grandis HOM05D010218 ORTHO05D195299 1.5e-08 66.6 65 55.4
Eucgr.C01847 Eucalyptus grandis HOM05D000467 ORTHO05D007073 1.5e-08 66.6 126 38.9
Eucgr.E03184 Eucalyptus grandis HOM05D000009 ORTHO05D007072 2.0e-08 66.2 73 42.5
Eucgr.L00831 Eucalyptus grandis HOM05D010218 ORTHO05D191593 2.6e-08 65.9 46 73.9
Eucgr.C01629 Eucalyptus grandis HOM05D010218 ORTHO05D007072 3.3e-08 65.5 61 59.0
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 3.3e-08 65.5 76 46.1
Eucgr.E03330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.4e-08 65.1 66 51.5
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.4e-08 64.3 78 41.0
Eucgr.G00379 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.4e-08 64.3 71 45.1
Eucgr.C01326 Eucalyptus grandis HOM05D043617 ORTHO05D194881 9.7e-08 63.9 41 75.6
Eucgr.C02040 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.7e-08 63.9 71 46.5
Prupe.8G032100 Prunus persica HOM05D000005 ORTHO05D000012 9.7e-08 63.9 79 41.8
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 9.7e-08 63.9 76 44.7
PGR142G4263 Punica granatum HOM05D000005 ORTHO05D000012 9.7e-08 63.9 75 45.3
Eucgr.L01406 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-07 63.5 72 45.8
Prupe.8G034600 Prunus persica HOM05D000005 ORTHO05D000012 1.3e-07 63.5 79 41.8
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-07 63.5 76 44.7
PGR142G1153 Punica granatum HOM05D000005 ORTHO05D011244 1.3e-07 63.5 71 46.5
Eucgr.B01756 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-07 63.2 72 47.2
Eucgr.C01921 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.7e-07 63.2 72 44.4
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-07 62.8 75 44.0
Eucgr.F04312 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.8e-07 62.4 70 47.1
Eucgr.G00372 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.8e-07 62.4 72 45.8
MD10G1020500 Malus domestica HOM05D000005 ORTHO05D000012 2.8e-07 62.4 101 37.6
Manes.02G202100 Manihot esculenta HOM05D000005 ORTHO05D000012 2.8e-07 62.4 96 36.5
Eucgr.F04313 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.7e-07 62.0 70 42.9
Prupe.8G053300 Prunus persica HOM05D000005 ORTHO05D000012 4.8e-07 61.6 79 39.2
Nn8g41079 Nelumbo nucifera HOM05D000005 ORTHO05D000294 6.3e-07 61.2 67 43.3
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-07 61.2 78 42.3
CSS0023467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 8.2e-07 60.8 102 37.3
Eucgr.C00297 Eucalyptus grandis HOM05D000005 ORTHO05D007073 8.2e-07 60.8 81 40.7
Eucgr.E03173 Eucalyptus grandis HOM05D000009 ORTHO05D007072 8.2e-07 60.8 71 40.8
PGR142G2344 Punica granatum HOM05D000005 ORTHO05D000012 8.2e-07 60.8 76 36.8
PGR142G2594 Punica granatum HOM05D000005 ORTHO05D000012 8.2e-07 60.8 76 39.5
CSS0009559 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.1e-06 60.5 102 36.3
Eucgr.B01950 Eucalyptus grandis HOM05D000005 ORTHO05D191270 1.1e-06 60.5 61 42.6
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-06 60.5 72 41.7
Eucgr.F04314 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.1e-06 60.5 74 44.6
RcHm_v2.0_Chr6g0260811 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-06 60.5 101 36.6
Eucgr.C04272 Eucalyptus grandis HOM05D000005 ORTHO05D035199 1.4e-06 60.1 79 40.5
Eucgr.D00728 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.4e-06 60.1 78 43.6
FAN06G4676 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.4e-06 60.1 97 34.0
MD05G1022400 Malus domestica HOM05D000005 ORTHO05D000012 1.4e-06 60.1 97 34.0
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 1.4e-06 60.1 71 45.1
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-06 60.1 78 38.5
QL07p005737 Quercus lobata HOM05D000005 ORTHO05D000012 1.4e-06 60.1 83 42.2
Eucgr.C02865 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-06 59.7 70 44.3
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-06 59.7 96 40.6
Eucgr.J01330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.8e-06 59.7 72 43.1
Eucgr.J01336 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.8e-06 59.7 71 46.5
Eucgr.C00513 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.4e-06 59.3 81 39.5
Eucgr.L01940 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.4e-06 59.3 65 49.2
Medtr7g078180 Medicago truncatula HOM05D000005 ORTHO05D000012 2.4e-06 59.3 100 37.0
PGR142G2106 Punica granatum HOM05D059705 ORTHO05D007072 2.4e-06 59.3 78 42.3
Eucgr.E03177 Eucalyptus grandis HOM05D000009 ORTHO05D007072 3.1e-06 58.9 71 40.8
FAN27G2200 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.1e-06 58.9 102 34.3
CSS0042100 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.1e-06 58.5 102 35.3
CAN.G308.52 Capsicum annuum HOM05D000005 ORTHO05D012501 4.1e-06 58.5 101 36.6
Cfa009068 Carpinus fangiana HOM05D000005 ORTHO05D000012 4.1e-06 58.5 95 37.9
Ciclev10018572m.g Citrus clementina HOM05D000005 ORTHO05D000012 4.1e-06 58.5 102 36.3
Eucgr.E03194 Eucalyptus grandis HOM05D000009 ORTHO05D007072 4.1e-06 58.5 73 39.7
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.1e-06 58.5 76 40.8
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-06 58.5 78 42.3
Eucgr.C01352 Eucalyptus grandis HOM05D010218 ORTHO05D192971 5.3e-06 58.2 36 80.6
Lj3g0003545 Lotus japonicus HOM05D000005 ORTHO05D000012 5.3e-06 58.2 101 34.7
Potri.011G009400 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.3e-06 58.2 65 46.2
arahy.Tifrunner.gnm1.ann1.GFGJ54 Arachis hypogaea HOM05D000005 ORTHO05D000012 7.0e-06 57.8 65 43.1
arahy.Tifrunner.gnm1.ann1.ZZ0VZ9 Arachis hypogaea HOM05D000005 ORTHO05D000012 7.0e-06 57.8 65 41.5
Eucgr.H03735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.0e-06 57.8 76 44.7
RcHm_v2.0_Chr1g0349221 Rosa chinensis HOM05D000005 ORTHO05D000012 7.0e-06 57.8 74 43.2
C04p55430 Brassica napus HOM05D000005 ORTHO05D000012 9.1e-06 57.4 73 42.5
Eucgr.A00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.1e-06 57.4 76 47.4
FAN21G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.1e-06 57.4 101 35.6
PGR142G1159 Punica granatum HOM05D000005 ORTHO05D017912 9.1e-06 57.4 78 41.0
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 9.1e-06 57.4 64 45.3


User provided reference genes

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