Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01394 Eucalyptus grandis HOM05D018689 ORTHO05D029333 7.1e-188 661.0 485 100.0
Eucgr.E03543 Eucalyptus grandis HOM05D018689 ORTHO05D192820 1.3e-120 437.6 485 80.0
Eucgr.K01940 Eucalyptus grandis HOM05D012617 ORTHO05D007072 4.5e-17 93.6 318 38.7
Eucgr.C03975 Eucalyptus grandis HOM05D000005 ORTHO05D007073 6.5e-16 89.7 281 31.0
Eucgr.F02533 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.5e-16 89.7 231 33.8
Eucgr.C03964 Eucalyptus grandis HOM05D012617 ORTHO05D007072 4.2e-15 87.0 214 35.5
Eucgr.C03961 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.2e-15 86.3 331 38.4
PGR004G1357 Punica granatum HOM05D018689 ORTHO05D007072 1.6e-14 85.1 322 34.8
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-14 85.1 240 47.9
Eucgr.C03970 Eucalyptus grandis HOM05D000005 ORTHO05D194797 2.7e-14 84.3 317 37.5
Eucgr.J01315 Eucalyptus grandis HOM05D018689 ORTHO05D029333 1.0e-13 82.4 244 33.2
Eucgr.E02004 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.4e-13 82.0 243 29.2
Eucgr.E01979 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.8e-13 81.6 246 29.3
Eucgr.C02040 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.3e-13 81.3 342 37.1
Eucgr.F03887 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.0e-13 80.9 255 30.6
Eucgr.H02212 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.7e-13 79.7 337 35.9
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-12 78.6 265 31.7
Eucgr.H03745 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.0e-12 78.2 249 31.7
Eucgr.E02523 Eucalyptus grandis HOM05D012617 ORTHO05D007072 9.7e-12 75.9 261 29.5
PGR142G4482 Punica granatum HOM05D000005 ORTHO05D007073 1.3e-11 75.5 313 38.3
Eucgr.E02513 Eucalyptus grandis HOM05D012617 ORTHO05D007072 2.2e-11 74.7 287 28.2
Eucgr.E02522 Eucalyptus grandis HOM05D012617 ORTHO05D007073 2.2e-11 74.7 199 31.7
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 2.2e-11 74.7 304 41.8
Eucgr.J01303 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.8e-11 74.3 321 27.1
Eucgr.C02074 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.7e-11 73.9 313 36.1
Eucgr.D01597 Eucalyptus grandis HOM05D012617 ORTHO05D194113 4.8e-11 73.6 234 28.6
Eucgr.L01460 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.8e-11 73.6 255 29.4
PGR142G2658 Punica granatum HOM05D000005 ORTHO05D007072 4.8e-11 73.6 228 30.3
Eucgr.C02044 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.3e-11 73.2 337 26.4
PGR044G0625 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-11 73.2 266 27.1
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.2e-11 72.8 292 33.9
Eucgr.K01934 Eucalyptus grandis HOM05D012617 ORTHO05D007072 1.1e-10 72.4 199 33.7
Eucgr.H03694 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-10 71.6 323 27.6
PGR044G0279 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-10 71.6 214 29.4
PGR044G1419 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-10 71.6 231 31.2
Eucgr.C02055 Eucalyptus grandis HOM05D018689 ORTHO05D007072 4.1e-10 70.5 312 36.5
Eucgr.C02646 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.1e-10 70.5 331 26.3
Eucgr.J01320 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.3e-10 70.1 271 26.2
Eucgr.L01871 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.3e-10 70.1 329 25.5
Eucgr.L00696 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.0e-10 69.7 135 36.3
Eucgr.H03738 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-09 68.9 300 28.3
PGR044G2537 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-09 68.6 304 40.8
Eucgr.H03679 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.0e-09 68.2 277 29.2
Eucgr.H03746 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.0e-09 68.2 206 32.0
Eucgr.C02640 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-09 67.8 192 31.2
PGR142G4263 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-09 67.8 325 25.2
Eucgr.C04271 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.5e-09 67.4 315 36.2
Eucgr.E01971 Eucalyptus grandis HOM05D000005 ORTHO05D011459 3.5e-09 67.4 219 28.3
PGR044G2498 Punica granatum HOM05D000005 ORTHO05D011459 3.5e-09 67.4 228 31.6
Eucgr.F03913 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.9e-09 66.6 105 41.0
Eucgr.H03735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.7e-09 66.2 262 30.2
Eucgr.B01065 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.0e-08 65.9 348 25.6
Eucgr.F04309 Eucalyptus grandis HOM05D018689 ORTHO05D007072 1.0e-08 65.9 208 32.2
Eucgr.E01990 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.7e-08 65.1 172 31.4
Eucgr.C02087 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.9e-08 64.3 240 30.4
Eucgr.C02618 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.8e-08 63.9 231 31.2
Eucgr.C02638 Eucalyptus grandis HOM05D000005 ORTHO05D011459 3.8e-08 63.9 231 31.2
Eucgr.H03707 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.8e-08 63.9 209 32.5
PGR004G2074 Punica granatum HOM05D000005 ORTHO05D000012 3.8e-08 63.9 250 24.8
Eucgr.H03847 Eucalyptus grandis HOM05D000005 ORTHO05D007073 5.0e-08 63.5 200 31.5
Eucgr.H03812 Eucalyptus grandis HOM05D000005 ORTHO05D029333 6.5e-08 63.2 328 25.3
Eucgr.E03126 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-07 62.4 209 31.1
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-07 62.4 336 24.7
Eucgr.C04272 Eucalyptus grandis HOM05D000005 ORTHO05D035199 1.5e-07 62.0 208 29.8
Eucgr.L01940 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-07 62.0 307 25.1
SEGI_18624 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.5e-07 62.0 274 25.2
Eucgr.C01649 Eucalyptus grandis HOM05D012433 ORTHO05D007072 1.9e-07 61.6 192 32.3
Eucgr.C02630 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.2e-07 60.8 293 37.5
Eucgr.C02628 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.5e-07 60.1 305 23.9
Eucgr.C04276 Eucalyptus grandis HOM05D000005 ORTHO05D194585 5.5e-07 60.1 282 36.9
Eucgr.E01871 Eucalyptus grandis HOM05D012433 ORTHO05D007072 5.5e-07 60.1 330 24.8
Eucgr.B00001 Eucalyptus grandis HOM05D019435 ORTHO05D007072 7.2e-07 59.7 231 26.4
PGR004G0619 Punica granatum HOM05D017779 ORTHO05D007072 7.2e-07 59.7 297 27.3
PGR063G0003 Punica granatum HOM05D017779 ORTHO05D007072 7.2e-07 59.7 171 33.9
PGR065G0009 Punica granatum HOM05D017779 ORTHO05D007072 7.2e-07 59.7 297 27.3
Eucgr.C02641 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.4e-07 59.3 214 29.4
Eucgr.C02623 Eucalyptus grandis HOM05D000005 ORTHO05D017912 1.6e-06 58.5 162 35.8
Eucgr.H03741 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.1e-06 58.2 224 25.9
Eucgr.C02655 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-06 57.8 256 39.1
Eucgr.C03957 Eucalyptus grandis HOM05D000005 ORTHO05D193097 2.7e-06 57.8 226 31.0
Medtr3g467340 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 57.8 191 27.2
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-06 57.4 169 51.5
PGR142G3252 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-06 57.4 234 25.2
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.7e-06 57.0 143 35.0
Eucgr.L00490 Eucalyptus grandis HOM05D000005 ORTHO05D007073 6.1e-06 56.6 178 32.6
PGR044G1303 Punica granatum HOM05D000005 ORTHO05D011459 6.1e-06 56.6 257 29.6
PGR044G2023 Punica granatum HOM05D000005 ORTHO05D336776 6.1e-06 56.6 253 27.3


User provided reference genes

Program Settings