Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.3e-87 325.5 161 100.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 4.6e-43 178.3 164 56.7
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 7.4e-41 171.0 159 57.9
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 3.7e-40 168.7 158 58.2
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 1.8e-39 166.4 160 58.1
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 6.9e-39 164.5 163 56.4
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 1.5e-38 163.3 155 57.4
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 2.6e-38 162.5 162 55.6
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.4e-38 162.2 161 53.4
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 7.6e-38 161.0 162 54.9
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 1.7e-37 159.8 166 54.8
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 2.2e-37 159.5 160 56.2
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 1.2e-35 153.7 169 49.1
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 2.1e-35 152.9 165 53.3
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 4.6e-35 151.8 169 52.7
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 1.0e-34 150.6 161 52.2
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 8.7e-34 147.5 161 53.4
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 8.7e-34 147.5 166 51.2
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 1.1e-33 147.1 157 51.6
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 1.5e-33 146.7 166 50.0
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.5e-33 146.7 166 50.0
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.7e-33 144.8 158 52.5
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.3e-32 143.7 166 50.6
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.6e-32 143.3 166 50.0
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 4.8e-32 141.7 163 48.5
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 6.3e-32 141.4 165 49.1
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 6.3e-32 141.4 165 48.5
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 1.1e-31 140.6 147 54.4
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.8e-31 139.8 166 50.6
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 1.8e-31 139.8 157 51.6
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.8e-31 139.8 163 48.5
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 5.3e-31 138.3 155 51.0
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 6.9e-31 137.9 161 49.1
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 3.4e-30 135.6 164 48.2
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 7.6e-30 134.4 157 47.8
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 7.6e-30 134.4 165 49.7
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 7.6e-30 134.4 160 48.8
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.0e-29 134.0 160 50.0
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 1.7e-29 133.3 168 46.4
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 2.2e-29 132.9 156 48.1
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 3.8e-29 132.1 165 45.5
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 6.5e-29 131.3 135 56.3
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 6.5e-29 131.3 158 46.8
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.1e-28 130.6 163 47.9
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 1.4e-28 130.2 162 50.0
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 2.5e-28 129.4 157 47.1
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 2.5e-28 129.4 99 63.6
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 3.2e-28 129.0 163 46.6
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 4.2e-28 128.6 167 50.3
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 4.2e-28 128.6 165 44.8
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 7.2e-28 127.9 162 47.5
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 1.2e-27 127.1 157 47.1
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 1.2e-27 127.1 163 45.4
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 2.7e-27 125.9 157 46.5
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 5.1e-26 121.7 165 45.5
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 8.8e-26 120.9 165 42.4
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 1.1e-25 120.6 160 46.2
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 1.9e-25 119.8 152 46.1
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 2.5e-25 119.4 128 50.8
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 1.7e-24 116.7 162 45.7
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 5.3e-23 111.7 169 42.0
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 9.1e-23 110.9 153 41.8
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 1.5e-22 110.2 166 39.8
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 2.6e-22 109.4 156 42.9
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 4.5e-22 108.6 145 43.4
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 7.7e-22 107.8 164 38.4
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 1.7e-21 106.7 157 42.7
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 2.9e-21 105.9 157 43.3
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 6.7e-18 94.7 96 57.3
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.5e-17 93.6 103 48.5
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 1.1e-12 77.4 160 35.6


User provided reference genes

Program Settings