Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.2e-53 213.0 110 100.0
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 9.9e-29 130.2 69 95.7
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 2.7e-26 122.1 69 88.4
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 3.0e-25 118.6 69 87.0
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 1.1e-24 116.7 69 81.2
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 2.5e-24 115.5 66 86.4
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 4.3e-24 114.8 66 87.9
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 7.3e-24 114.0 66 80.3
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 9.5e-24 113.6 65 84.6
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.6e-23 112.8 67 80.6
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.6e-23 112.8 67 80.6
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 2.1e-23 112.5 66 84.8
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 2.8e-23 112.1 67 80.6
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 2.8e-23 112.1 72 75.0
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 6.2e-23 110.9 66 83.3
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 6.2e-23 110.9 59 94.9
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 6.2e-23 110.9 66 83.3
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 8.1e-23 110.5 69 82.6
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 8.1e-23 110.5 65 80.0
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 8.1e-23 110.5 64 82.8
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 1.1e-22 110.2 69 82.6
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 1.1e-22 110.2 69 82.6
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 1.4e-22 109.8 69 76.8
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.4e-22 109.0 59 93.2
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 2.4e-22 109.0 65 81.5
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 4.0e-22 108.2 65 81.5
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 6.8e-22 107.5 69 72.5
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 6.8e-22 107.5 69 75.4
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 8.9e-22 107.1 64 84.4
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 8.9e-22 107.1 69 76.8
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 1.2e-21 106.7 86 66.3
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 1.2e-21 106.7 63 81.0
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 3.4e-21 105.1 65 75.4
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 7.6e-21 104.0 63 81.0
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 7.6e-21 104.0 64 78.1
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 9.9e-21 103.6 69 72.5
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 9.9e-21 103.6 64 76.6
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 2.9e-20 102.1 66 74.2
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 3.8e-20 101.7 69 72.5
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 3.8e-20 101.7 61 77.0
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 3.8e-20 101.7 60 80.0
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 1.4e-19 99.8 63 76.2
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 1.4e-19 99.8 59 79.7
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 3.2e-19 98.6 64 73.4
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 3.2e-19 98.6 62 74.2
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 9.2e-19 97.1 61 77.0
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 9.2e-19 97.1 57 82.5
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 1.6e-18 96.3 63 73.0
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 2.1e-18 95.9 64 71.9
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 2.1e-18 95.9 59 79.7
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 2.7e-18 95.5 59 79.7
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 4.6e-18 94.7 64 68.8
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 6.0e-18 94.4 59 76.3
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 7.8e-18 94.0 59 74.6
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 1.0e-17 93.6 59 78.0
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 1.7e-17 92.8 66 63.6
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 1.7e-17 92.8 65 70.8
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 1.7e-17 92.8 59 76.3
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 2.3e-17 92.4 59 72.9
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 3.0e-17 92.0 56 82.1
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 3.9e-17 91.7 59 78.0
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 5.1e-17 91.3 65 69.2
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 6.6e-17 90.9 55 78.2
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 1.1e-16 90.1 58 74.1
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.1e-16 90.1 56 76.8
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.1e-16 90.1 56 76.8
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 1.1e-16 90.1 65 67.7
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 1.5e-16 89.7 56 76.8
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 1.5e-16 89.7 56 76.8
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 1.5e-16 89.7 66 62.1
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 1.9e-16 89.4 55 76.4
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 1.9e-16 89.4 59 72.9
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 2.5e-16 89.0 54 79.6
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 3.3e-16 88.6 59 71.2
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 3.3e-16 88.6 57 73.7
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 4.3e-16 88.2 54 81.5
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.6e-16 87.8 59 71.2
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.6e-16 87.8 59 72.9
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.6e-16 87.8 59 72.9
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.6e-16 87.8 59 72.9
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 1.2e-15 86.7 62 67.7
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 1.6e-15 86.3 64 60.9
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 2.1e-15 85.9 59 69.5
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 2.1e-15 85.9 58 72.4
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 2.1e-15 85.9 64 62.5
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 2.1e-15 85.9 71 60.6
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 2.8e-15 85.5 54 75.9
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 8.1e-15 84.0 63 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 2.6e-13 79.0 63 60.3
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 4.4e-13 78.2 55 61.8
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 5.8e-13 77.8 64 60.9
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 1.7e-12 76.3 55 67.3
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 6.4e-12 74.3 60 61.7
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 6.4e-12 74.3 55 65.5
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 6.4e-12 74.3 55 65.5
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 1.1e-11 73.6 53 66.0
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 1.9e-11 72.8 53 66.0
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 1.2e-10 70.1 64 51.6
MBI01_g34140_MAGBIO Magnolia biondii HOM05D007420 ORTHO05D009353 1.0e-09 67.0 45 66.7
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 3.0e-09 65.5 43 76.7
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 5.6e-08 61.2 74 47.3
Eucgr.C01292 Eucalyptus grandis HOM05D007420 ORTHO05D009353 9.6e-08 60.5 30 96.7
Glyma.13G033951 Glycine max HOM05D007420 ORTHO05D009353 9.6e-08 60.5 38 71.1


User provided reference genes

Program Settings