Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 8.3e-70 266.9 136 100.0
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 8.7e-43 177.2 125 75.2
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 3.3e-42 175.3 127 70.1
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 9.6e-42 173.7 125 74.4
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 9.6e-42 173.7 125 72.8
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 3.7e-41 171.8 134 70.1
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 4.8e-41 171.4 127 72.4
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 1.1e-40 170.2 134 70.1
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 1.4e-40 169.9 134 69.4
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 1.4e-40 169.9 134 69.4
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 3.1e-40 168.7 129 69.8
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 4.0e-40 168.3 128 71.1
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 4.0e-40 168.3 135 69.6
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 9.0e-40 167.2 129 66.7
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 1.2e-39 166.8 124 69.4
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.5e-39 166.4 133 66.9
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 2.0e-39 166.0 125 70.4
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.0e-39 166.0 125 70.4
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 2.6e-39 165.6 128 70.3
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.6e-39 165.6 125 71.2
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 2.6e-39 165.6 125 71.2
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.4e-39 165.2 134 65.7
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.4e-39 165.2 134 65.7
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 5.8e-39 164.5 134 65.7
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.8e-39 164.5 134 64.9
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 5.8e-39 164.5 134 67.9
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 7.6e-39 164.1 134 67.9
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 1.7e-38 162.9 134 67.2
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.9e-38 162.2 134 64.9
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 6.4e-38 161.0 124 66.9
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 8.4e-38 160.6 124 69.4
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 8.4e-38 160.6 126 66.7
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 1.1e-37 160.2 126 69.0
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.4e-37 159.1 134 64.9
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 2.4e-37 159.1 125 64.8
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 3.2e-37 158.7 124 68.5
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.5e-37 157.9 125 68.8
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.5e-37 157.9 125 68.8
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 7.1e-37 157.5 128 62.5
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 1.2e-36 156.8 134 64.2
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 1.2e-36 156.8 134 64.2
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.6e-36 156.4 121 68.6
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 2.1e-36 156.0 124 62.9
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 4.6e-36 154.8 122 68.0
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 4.6e-36 154.8 124 66.9
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 4.6e-36 154.8 130 64.6
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 4.6e-36 154.8 124 65.3
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 6.0e-36 154.5 120 66.7
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 7.9e-36 154.1 122 64.8
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.0e-35 153.7 124 63.7
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 1.8e-35 152.9 120 63.3
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 2.3e-35 152.5 125 65.6
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 2.3e-35 152.5 124 64.5
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 3.0e-35 152.1 124 66.1
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.9e-35 151.8 125 66.4
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 3.9e-35 151.8 125 64.8
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 3.9e-35 151.8 125 66.4
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 3.9e-35 151.8 121 69.4
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 8.7e-35 150.6 123 61.0
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 8.7e-35 150.6 125 65.6
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 8.7e-35 150.6 125 66.4
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 8.7e-35 150.6 121 66.9
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.5e-34 149.8 122 63.9
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 1.9e-34 149.4 122 61.5
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 1.9e-34 149.4 122 61.5
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.5e-34 149.1 114 64.0
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 2.5e-34 149.1 118 68.6
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 2.5e-34 149.1 121 63.6
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.3e-33 146.7 125 62.4
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 1.6e-33 146.4 116 63.8
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 2.1e-33 146.0 128 60.9
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 2.8e-33 145.6 129 59.7
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 2.8e-33 145.6 124 60.5
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 3.7e-33 145.2 116 65.5
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 3.7e-33 145.2 120 65.8
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 3.7e-33 145.2 116 64.7
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 4.8e-33 144.8 123 62.6
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 1.4e-32 143.3 116 64.7
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 1.4e-32 143.3 116 62.9
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 2.4e-32 142.5 118 62.7
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 2.4e-32 142.5 125 64.8
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 1.5e-31 139.8 119 60.5
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 1.3e-30 136.7 106 67.9
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.7e-30 136.3 126 59.5
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 2.9e-30 135.6 119 61.3
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 8.4e-30 134.0 123 58.5
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 7.1e-29 131.0 121 60.3
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 9.3e-29 130.6 126 57.9
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 4.6e-28 128.3 118 55.9
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 2.5e-26 122.5 113 55.8
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.3e-25 120.2 104 65.4
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 4.8e-25 118.2 125 53.6
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 1.4e-24 116.7 116 52.6
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 3.1e-24 115.5 118 56.8
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.7e-22 109.8 118 53.4
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 3.9e-19 98.6 118 48.3
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 6.7e-19 97.8 108 50.9
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.5e-18 95.9 113 46.9
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 3.7e-17 92.0 103 54.4
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 4.1e-16 88.6 110 45.5
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 7.4e-10 67.8 51 70.6
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.0e-06 57.4 64 51.6


User provided reference genes

Program Settings