Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.5e-68 263.1 173 100.0
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 2.9e-27 125.9 182 51.1
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 5.0e-27 125.2 205 43.9
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.6e-25 120.2 202 46.5
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.0e-24 117.5 201 40.3
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.3e-24 116.3 205 42.4
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 6.7e-24 114.8 209 42.6
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 9.7e-23 110.9 206 43.7
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 9.7e-23 110.9 226 36.3
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.3e-22 110.5 212 38.2
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.7e-22 110.2 199 46.2
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.4e-21 107.1 226 38.5
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 2.4e-21 106.3 206 38.3
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 3.1e-21 105.9 204 41.7
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 3.1e-21 105.9 201 43.8
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 1.2e-20 104.0 202 37.1
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.6e-20 103.6 179 43.0
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 4.5e-20 102.1 199 42.2
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 4.5e-20 102.1 205 41.5
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 4.5e-20 102.1 202 41.6
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.7e-20 101.3 203 41.9
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.3e-19 100.5 201 39.8
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 2.2e-19 99.8 165 42.4
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.9e-19 99.4 206 36.4
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.1e-18 97.4 178 39.9
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.1e-18 97.4 201 45.8
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 1.5e-18 97.1 217 51.2
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.5e-18 96.3 196 38.8
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.2e-18 95.9 214 41.1
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.6e-17 93.6 207 35.7
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.6e-17 93.6 207 35.7
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.6e-17 93.6 207 41.5
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.6e-17 93.6 197 38.1
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.6e-17 93.6 211 37.0
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.7e-17 92.0 206 38.8
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.0e-16 90.9 177 41.2
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.8e-16 90.1 203 38.4
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 2.3e-16 89.7 196 38.3
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 2.3e-16 89.7 196 38.3
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 2.3e-16 89.7 195 42.1
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 3.0e-16 89.4 203 40.4
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 6.8e-16 88.2 196 38.3
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 8.8e-16 87.8 199 37.2
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 1.2e-15 87.4 198 38.9
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.2e-15 87.4 198 38.9
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 1.2e-15 87.4 198 38.9
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.2e-15 87.4 179 39.1
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.2e-15 87.4 201 37.8
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.5e-15 87.0 196 37.8
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 1.5e-15 87.0 203 40.4
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 1.5e-15 87.0 213 33.3
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 2.0e-15 86.7 198 38.4
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.6e-15 86.3 202 40.6
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 3.4e-15 85.9 199 42.7
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 4.4e-15 85.5 211 37.0
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 4.4e-15 85.5 197 38.1
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.7e-15 85.1 167 41.3
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 5.7e-15 85.1 219 36.1
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 7.5e-15 84.7 174 42.5
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 7.5e-15 84.7 218 40.4
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 7.5e-15 84.7 197 32.0
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 9.8e-15 84.3 202 33.7
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.7e-14 83.6 165 39.4
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.2e-14 83.2 201 42.8
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.8e-14 82.8 215 42.3
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.7e-14 82.4 204 34.3
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 4.8e-14 82.0 209 33.5
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 4.8e-14 82.0 205 39.5
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 4.8e-14 82.0 197 34.0
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 6.3e-14 81.6 194 42.8
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 6.3e-14 81.6 218 41.7
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 6.3e-14 81.6 204 40.2
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 8.3e-14 81.3 198 36.4
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 8.3e-14 81.3 203 34.0
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 8.3e-14 81.3 206 40.3
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 8.3e-14 81.3 205 39.5
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 8.3e-14 81.3 199 33.7
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.4e-13 80.5 198 33.3
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-13 80.5 203 33.5
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.4e-13 80.5 203 33.5
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.4e-13 80.5 118 46.6
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 1.4e-13 80.5 205 40.0
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.8e-13 80.1 202 35.6
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 1.8e-13 80.1 203 33.5
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 1.8e-13 80.1 138 41.3
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 2.4e-13 79.7 213 35.2
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.4e-13 79.7 203 35.5
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 3.1e-13 79.3 209 34.9
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.1e-13 79.3 207 32.9
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 4.1e-13 79.0 201 34.3
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 5.4e-13 78.6 183 36.6
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 5.4e-13 78.6 162 38.3
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 5.4e-13 78.6 140 47.1
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 7.0e-13 78.2 203 33.0
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 7.0e-13 78.2 203 33.0
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 7.0e-13 78.2 208 37.5
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 7.0e-13 78.2 191 37.2
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 9.1e-13 77.8 204 33.8
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 2.0e-12 76.6 194 44.3
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.7e-12 76.3 211 35.5
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.7e-12 76.3 204 33.8
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.5e-12 75.5 206 36.9
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 5.9e-12 75.1 157 38.2
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 7.7e-12 74.7 176 36.4
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 7.7e-12 74.7 226 39.4
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 7.7e-12 74.7 210 42.9
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.0e-11 74.3 92 50.0
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 1.0e-11 74.3 200 40.5
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.3e-11 73.9 210 33.3
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.7e-11 73.6 186 39.8
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 2.2e-11 73.2 199 33.7
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.2e-11 73.2 220 37.3
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 6.5e-11 71.6 168 35.1
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.5e-11 71.6 211 35.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 8.5e-11 71.2 158 38.6
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 8.5e-11 71.2 164 37.2
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 1.1e-10 70.9 138 41.3
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.5e-10 70.5 210 35.2
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.5e-10 69.7 147 35.4
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 2.5e-10 69.7 153 38.6
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 2.5e-10 69.7 137 40.9
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 3.2e-10 69.3 166 36.1
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 4.2e-10 68.9 160 34.4
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 4.2e-10 68.9 199 35.2
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 4.2e-10 68.9 210 34.8
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.2e-10 68.9 212 34.4
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 9.4e-10 67.8 134 38.8
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-09 67.4 221 33.5
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 1.2e-09 67.4 112 41.1
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.6e-09 67.0 167 35.9
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.6e-09 67.0 167 35.9
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.6e-09 67.0 197 38.1
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.6e-09 67.0 126 37.3
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 2.1e-09 66.6 167 44.3
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 2.1e-09 66.6 169 33.7
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 2.7e-09 66.2 156 39.1
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 3.6e-09 65.9 145 34.5
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 3.6e-09 65.9 129 36.4
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 6.1e-09 65.1 200 34.5
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 2.3e-08 63.2 211 32.7
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 4.0e-08 62.4 140 41.4
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 5.2e-08 62.0 168 33.9
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 8.8e-08 61.2 206 31.6
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 8.8e-08 61.2 135 37.0
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.2e-07 60.8 168 36.3
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.5e-07 60.5 208 36.5
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 2.0e-07 60.1 159 34.0
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 3.4e-07 59.3 215 36.3
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 5.7e-07 58.5 77 49.4
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 5.7e-07 58.5 178 33.1
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 5.7e-07 58.5 77 49.4
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 5.7e-07 58.5 64 53.1
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 5.7e-07 58.5 187 34.8
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 7.5e-07 58.2 185 34.1
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.3e-06 57.4 186 31.2
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 2.8e-06 56.2 155 41.3
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.8e-06 56.2 117 39.3
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 3.7e-06 55.8 135 31.1
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 4.9e-06 55.5 77 48.1


User provided reference genes

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