Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.2e-177 625.5 329 100.0
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 1.1e-131 473.8 327 72.5
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 5.0e-129 464.9 326 72.7
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 6.2e-127 458.0 328 73.5
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.1e-126 457.2 326 69.6
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.4e-126 456.8 329 69.9
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 1.8e-126 456.4 332 71.1
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 2.3e-126 456.1 326 73.6
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 6.8e-126 454.5 329 71.7
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 6.8e-126 454.5 327 71.6
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 8.9e-126 454.1 327 73.7
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 2.0e-125 453.0 329 69.3
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 7.5e-125 451.1 327 68.5
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 7.5e-125 451.1 327 69.7
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.3e-124 450.3 327 70.3
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 2.9e-124 449.1 326 69.9
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 3.7e-124 448.7 327 72.8
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 4.9e-124 448.4 328 71.3
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 6.4e-124 448.0 326 69.0
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 1.1e-123 447.2 329 70.2
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.9e-123 446.4 332 69.9
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 3.2e-123 445.7 327 67.9
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 3.2e-123 445.7 327 69.7
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.1e-123 445.3 326 68.1
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 5.4e-123 444.9 326 71.8
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 9.2e-123 444.1 331 69.5
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 9.2e-123 444.1 329 69.9
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.2e-122 443.7 331 70.7
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.2e-122 443.7 326 70.6
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.2e-122 443.7 326 70.2
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 2.1e-122 443.0 329 68.1
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 3.5e-122 442.2 326 70.6
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 3.5e-122 442.2 330 70.9
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 4.6e-122 441.8 329 69.9
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 4.6e-122 441.8 328 72.3
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 6.0e-122 441.4 265 81.5
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.0e-121 440.7 327 70.9
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.3e-121 440.3 265 81.1
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 3.0e-121 439.1 328 68.9
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 5.1e-121 438.3 326 66.9
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 1.9e-120 436.4 329 68.7
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 1.9e-120 436.4 326 68.1
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.5e-120 436.0 328 70.7
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 3.3e-120 435.6 328 67.4
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 3.3e-120 435.6 330 67.0
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 5.6e-120 434.9 329 68.7
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 5.6e-120 434.9 329 69.0
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 9.5e-120 434.1 327 68.2
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 1.2e-119 433.7 332 69.0
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 1.2e-119 433.7 327 68.2
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.1e-119 433.0 326 67.2
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 3.6e-119 432.2 332 68.7
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 3.6e-119 432.2 327 67.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 4.7e-119 431.8 326 68.7
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 4.7e-119 431.8 332 71.4
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 8.1e-119 431.0 329 71.7
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 8.1e-119 431.0 332 67.2
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 1.1e-118 430.6 327 67.9
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 1.1e-118 430.6 329 66.9
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.4e-118 429.5 329 68.4
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 2.4e-118 429.5 353 64.9
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 5.2e-118 428.3 327 65.7
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 6.8e-118 427.9 329 66.9
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 8.9e-118 427.6 326 66.9
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 8.9e-118 427.6 364 62.4
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.2e-117 427.2 326 66.3
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.0e-117 426.4 332 69.0
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 2.0e-117 426.4 328 67.7
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.6e-117 426.0 327 65.1
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.6e-117 426.0 332 68.7
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 2.6e-117 426.0 336 67.3
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 3.4e-117 425.6 332 68.7
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 9.9e-117 424.1 327 65.1
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 1.7e-116 423.3 331 68.0
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 2.2e-116 422.9 326 66.3
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 2.9e-116 422.5 319 67.4
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 2.9e-116 422.5 324 67.6
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.8e-116 422.2 332 68.4
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.9e-116 421.8 333 69.7
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 6.4e-116 421.4 330 69.1
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 8.4e-116 421.0 326 66.0
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.1e-115 420.6 289 72.7
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 1.1e-115 420.6 336 65.2
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 1.4e-115 420.2 326 65.0
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.9e-115 419.9 328 66.5
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.9e-115 419.9 319 67.4
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 2.4e-115 419.5 329 65.7
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 2.4e-115 419.5 329 67.8
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 3.2e-115 419.1 331 66.2
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 3.2e-115 419.1 331 66.2
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 4.6e-114 415.2 326 64.7
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 6.0e-114 414.8 335 68.1
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 6.0e-114 414.8 326 64.4
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 6.0e-114 414.8 353 63.5
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.0e-113 414.1 335 68.1
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 5.1e-113 411.8 336 67.6
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 4.4e-109 398.7 328 64.9
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 2.2e-108 396.4 263 74.5
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.9e-107 393.3 329 61.7
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 3.2e-107 392.5 282 69.1
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 4.3e-104 382.1 263 72.2
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 1.6e-103 380.2 295 65.8
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 4.8e-103 378.6 506 45.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 4.8e-103 378.6 271 68.3
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 1.8e-102 376.7 386 54.4
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 1.2e-101 374.0 319 64.9
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 7.9e-98 361.3 326 59.2
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 4.2e-83 312.4 307 52.1
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 9.3e-83 311.2 190 80.0
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-82 309.7 202 75.7
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 3.3e-80 302.8 263 57.0
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 3.3e-80 302.8 170 87.6
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.1e-78 297.7 182 80.8
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.0e-77 293.5 175 82.3
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 7.2e-75 285.0 175 79.4
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 2.1e-74 283.5 167 81.4
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.0e-60 238.0 209 57.9
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.3e-56 223.0 121 92.6
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.2e-53 214.5 190 60.0
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.2e-53 214.5 121 89.3
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 1.1e-51 208.0 122 83.6
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.1e-51 208.0 115 90.4
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.8e-49 200.7 190 58.9
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.8e-46 190.7 167 56.3
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.2e-44 183.7 121 81.0
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 8.5e-44 181.8 119 73.9
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.3e-41 173.7 128 75.0
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.2e-32 144.8 155 55.5
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 8.6e-20 102.1 73 69.9
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 2.4e-14 84.0 158 35.4
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 9.2e-14 82.0 79 57.0
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 4.7e-10 69.7 155 31.6
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 2.3e-09 67.4 144 32.6
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 1.2e-08 65.1 55 56.4
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.5e-08 64.7 147 33.3
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 2.6e-08 63.9 186 25.8
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.4e-08 63.5 52 67.3


User provided reference genes

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