Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01116 Eucalyptus grandis HOM05D009305 ORTHO05D010439 3.6e-39 164.5 83 100.0
DCAR_009212 Daucus carota HOM05D000639 ORTHO05D005966 5.5e-16 87.4 83 57.8
Potri.008G015800 Populus trichocarpa HOM05D003010 ORTHO05D010439 5.5e-16 87.4 82 56.1
Nn8g39368 Nelumbo nucifera HOM05D003010 ORTHO05D010439 2.1e-15 85.5 83 54.2
Sed0015404 Sechium edule HOM05D009305 ORTHO05D010439 2.1e-15 85.5 81 53.1
CsaV3_1G029730 Cucumis sativus L. HOM05D003010 ORTHO05D010439 8.0e-15 83.6 81 53.1
Potri.008G015100 Populus trichocarpa HOM05D003010 ORTHO05D010439 8.0e-15 83.6 82 56.1
TAR625G0712 Trochodendron aralioides HOM05D003010 ORTHO05D010439 2.3e-14 82.0 82 51.2
Manes.11G101800 Manihot esculenta HOM05D009305 ORTHO05D010439 4.0e-14 81.3 81 54.3
RcHm_v2.0_Chr2g0089271 Rosa chinensis HOM05D009305 ORTHO05D010439 1.2e-13 79.7 87 52.9
QL02p087437 Quercus lobata HOM05D009305 ORTHO05D010439 2.0e-13 79.0 80 51.2
CiPaw.04G169500 Carya illinoinensis HOM05D009305 ORTHO05D010439 4.4e-13 77.8 82 54.9
FAN26G0439 Fragaria x ananassa HOM05D009305 ORTHO05D010439 4.4e-13 77.8 88 52.3
Haze_25626 Corylus avellana HOM05D003010 ORTHO05D010439 2.8e-12 75.1 84 51.2
FAN19G2542 Fragaria x ananassa HOM05D009305 ORTHO05D010439 8.3e-12 73.6 88 52.3
Prupe.7G238200 Prunus persica HOM05D009305 ORTHO05D010439 8.3e-12 73.6 88 50.0
Thecc.09G121000 Theobroma cacao HOM05D029830 ORTHO05D010439 1.4e-11 72.8 85 52.9
Cfa003337 Carpinus fangiana HOM05D003010 ORTHO05D010439 1.8e-11 72.4 85 51.8
Aqoxy7G02055 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 2.4e-11 72.0 82 43.9
Atru.chr7.1234 Acer truncatum HOM05D009305 ORTHO05D010439 3.1e-11 71.6 85 51.8
Ciclev10010147m.g Citrus clementina HOM05D003010 ORTHO05D010439 2.0e-10 68.9 91 50.5
Lalb_Chr13g0302051 Lupinus albus HOM05D009305 ORTHO05D010439 2.0e-10 68.9 87 46.0
Lj4g0006068 Lotus japonicus HOM05D003010 ORTHO05D010439 2.7e-10 68.6 89 46.1
Lj4g0025656 Lotus japonicus HOM05D003010 ORTHO05D010439 2.7e-10 68.6 89 46.1
THA.LOC104811040 Tarenaya hassleriana HOM05D009305 ORTHO05D010439 2.7e-10 68.6 82 47.6
Glyma.17G117900 Glycine max HOM05D003010 ORTHO05D010439 3.5e-10 68.2 86 47.7
CDE01G0248 Ceratophyllum demersum HOM05D003010 ORTHO05D003623 2.2e-09 65.5 85 44.7
Phvul.003G161400 Phaseolus vulgaris HOM05D009305 ORTHO05D010439 5.0e-09 64.3 83 42.2
Sc18g0000820 Simmondsia chinensis HOM05D003010 ORTHO05D010439 5.0e-09 64.3 86 46.5
Rhsim01G0078400 Rhododendron simsii HOM05D003010 ORTHO05D010439 6.5e-09 63.9 88 46.6
TAR629G3508 Trochodendron aralioides HOM05D003010 ORTHO05D003623 6.5e-09 63.9 84 51.2
PSO339G5114 Papaver somniferum HOM05D003010 ORTHO05D010439 1.1e-08 63.2 89 41.6
PSO801G0586 Papaver somniferum HOM05D003010 ORTHO05D003623 1.1e-08 63.2 89 41.6
ECA234G2671 Erigeron canadensis HOM05D003010 ORTHO05D010439 3.2e-08 61.6 83 45.8
A02p05990 Brassica napus HOM05D009305 ORTHO05D010439 4.2e-08 61.2 85 45.9
BraA02t05551Z Brassica rapa HOM05D009305 ORTHO05D010439 4.2e-08 61.2 85 45.9
arahy.Tifrunner.gnm1.ann1.0EDZ2A Arachis hypogaea HOM05D009305 ORTHO05D010439 9.4e-08 60.1 90 45.6
AUR62033453 Chenopodium quinoa HOM05D003010 ORTHO05D010439 9.4e-08 60.1 82 43.9
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 9.4e-08 60.1 81 44.4
AL6G31590 Arabidopsis lyrata HOM05D009305 ORTHO05D010439 1.2e-07 59.7 86 44.2
TAR636G0256 Trochodendron aralioides HOM05D003010 ORTHO05D003623 1.2e-07 59.7 83 47.0
COL.COLO4_21678 Corchorus olitorius HOM05D003010 ORTHO05D003623 1.6e-07 59.3 84 46.4
A03p09790 Brassica napus HOM05D009305 ORTHO05D010439 2.1e-07 58.9 82 45.1
HPP92_023172 Vanilla planifolia HOM05D003010 ORTHO05D003623 2.1e-07 58.9 83 42.2
C03p11370 Brassica napus HOM05D009305 ORTHO05D010439 2.7e-07 58.5 82 45.1
CARHR192790 Cardamine hirsuta HOM05D009305 ORTHO05D010439 2.7e-07 58.5 85 43.5
Gorai.004G278100 Gossypium raimondii HOM05D029830 ORTHO05D010439 2.7e-07 58.5 76 48.7
BcaB01g04814 Brassica carinata HOM05D009305 ORTHO05D010439 3.6e-07 58.2 82 45.1
Aa31LG1G14180 Aethionema arabicum HOM05D009305 ORTHO05D010439 6.1e-07 57.4 79 44.3
BolC3t13610H Brassica oleracea HOM05D009305 ORTHO05D010439 8.0e-07 57.0 82 43.9
CSS0003493 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 8.0e-07 57.0 88 44.3
CDE04G1477 Ceratophyllum demersum HOM05D003010 ORTHO05D003623 1.0e-06 56.6 82 37.8
Gohir.A08G165900 Gossypium hirsutum HOM05D003010 ORTHO05D003623 1.0e-06 56.6 86 45.3
EL10Ac8g18592 Beta vulgaris HOM05D003010 ORTHO05D003623 1.4e-06 56.2 84 42.9
BraA03t10294Z Brassica rapa HOM05D009305 ORTHO05D010439 1.4e-06 56.2 82 43.9
Atru.chr1.925 Acer truncatum HOM05D003010 ORTHO05D003623 1.8e-06 55.8 85 41.2
AT5G20045 Arabidopsis thaliana HOM05D009305 ORTHO05D010439 1.8e-06 55.8 85 41.2
Gohir.A08G239500 Gossypium hirsutum HOM05D029830 ORTHO05D010439 1.8e-06 55.8 76 48.7
Gorai.004G194100 Gossypium raimondii HOM05D003010 ORTHO05D003623 1.8e-06 55.8 86 45.3
Thecc.03G243800 Theobroma cacao HOM05D003010 ORTHO05D003623 1.8e-06 55.8 86 43.0
BcaB05g22883 Brassica carinata HOM05D009305 ORTHO05D010439 2.3e-06 55.5 85 43.5
BcaC03g13728 Brassica carinata HOM05D009305 ORTHO05D010439 3.0e-06 55.1 81 40.7
BolC2t07005H Brassica oleracea HOM05D009305 ORTHO05D010439 3.0e-06 55.1 81 40.7
Cc06_g08930 Coffea canephora HOM05D018231 ORTHO05D010439 3.0e-06 55.1 82 46.3
GSVIVG01007344001 Vitis vinifera HOM05D003010 ORTHO05D003623 3.0e-06 55.1 82 45.1
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 4.0e-06 54.7 86 44.2
PSO782G2859 Papaver somniferum HOM05D003010 ORTHO05D003623 4.0e-06 54.7 83 45.8
TWI81G0439 Tripterygium wilfordii HOM05D003010 ORTHO05D003623 4.0e-06 54.7 81 45.7
Thhalv10015177m.g Eutrema salsugineum HOM05D009305 ORTHO05D010439 5.2e-06 54.3 85 40.0
CAN.G761.23 Capsicum annuum HOM05D003010 ORTHO05D003623 8.8e-06 53.5 81 44.4
Gohir.D08G184800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 8.8e-06 53.5 86 46.5
Lj5g0011838 Lotus japonicus HOM05D003010 ORTHO05D003623 8.8e-06 53.5 84 38.1
PSO063G3783 Papaver somniferum HOM05D003010 ORTHO05D003623 8.8e-06 53.5 82 42.7


User provided reference genes

Program Settings