Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.5e-51 204.1 92 100.0
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.6e-46 188.3 92 93.5
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.4e-46 187.6 92 93.5
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 5.9e-27 124.0 92 63.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 5.9e-27 124.0 92 66.3
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.0e-26 123.2 91 62.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.3e-26 122.9 91 63.7
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.2e-26 122.1 91 63.7
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.2e-26 122.1 92 62.0
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 8.5e-26 120.2 91 62.6
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.1e-25 119.8 91 61.5
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.1e-25 119.8 91 62.6
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.1e-25 119.8 91 60.4
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 1.9e-25 119.0 91 61.5
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.9e-25 119.0 91 63.7
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 2.5e-25 118.6 92 63.0
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 7.2e-25 117.1 90 64.4
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 9.4e-25 116.7 91 61.5
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 1.6e-24 115.9 91 58.2
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.0e-23 113.2 105 51.4
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.4e-23 112.8 90 55.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.8e-23 112.5 91 60.4
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.8e-23 112.5 91 60.4
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 3.0e-23 111.7 105 49.5
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 6.8e-23 110.5 91 59.3
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.2e-22 109.8 90 54.4
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.0e-22 109.0 91 56.0
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.6e-22 108.6 91 58.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 5.7e-22 107.5 91 54.9
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 5.7e-22 107.5 104 48.1
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 9.8e-22 106.7 105 48.6
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 9.8e-22 106.7 90 57.8
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.3e-21 106.3 91 57.1
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 1.7e-21 105.9 91 57.1
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.7e-21 105.9 91 54.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 2.2e-21 105.5 91 53.8
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 3.7e-21 104.8 91 52.7
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 4.8e-21 104.4 91 52.7
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.8e-21 104.4 87 52.9
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 8.3e-21 103.6 91 52.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 8.3e-21 103.6 91 52.7
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.1e-20 103.2 91 53.8
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.1e-20 103.2 90 55.6
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.1e-20 103.2 91 53.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-20 103.2 85 60.0
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.4e-20 102.8 88 53.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 1.8e-20 102.4 93 51.6
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 3.1e-20 101.7 91 59.3
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 4.1e-20 101.3 104 50.0
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 4.1e-20 101.3 90 55.6
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 4.1e-20 101.3 90 55.6
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 4.1e-20 101.3 68 69.1
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 7.0e-20 100.5 69 71.0
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 7.0e-20 100.5 98 45.9
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 9.1e-20 100.1 92 57.6
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 9.1e-20 100.1 104 46.2
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 2.0e-19 99.0 91 52.7
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 2.0e-19 99.0 91 51.6
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 2.7e-19 98.6 67 64.2
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.7e-19 98.6 91 51.6
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.7e-19 98.6 93 50.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 2.7e-19 98.6 105 48.6
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 4.5e-19 97.8 105 46.7
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 5.9e-19 97.4 91 52.7
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.0e-18 96.7 91 50.5
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.3e-18 96.3 67 64.2
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.7e-18 95.9 91 51.6
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.9e-18 95.1 93 50.5
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 5.0e-18 94.4 93 49.5
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 5.0e-18 94.4 92 47.8
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 6.5e-18 94.0 90 55.6
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.1e-17 93.2 105 47.6
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.1e-17 93.2 93 49.5
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.1e-17 93.2 93 49.5
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.5e-17 92.8 91 48.4
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.5e-17 92.0 105 41.9
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 4.2e-17 91.3 91 48.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 4.2e-17 91.3 93 50.5
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 7.2e-17 90.5 90 50.0
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.6e-16 89.4 90 46.7
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 2.8e-16 88.6 67 61.2
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.3e-15 85.5 90 43.3
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 4.0e-15 84.7 89 44.9
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 4.0e-15 84.7 91 46.2
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 8.8e-15 83.6 90 46.7
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 3.4e-14 81.6 63 58.7
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 3.4e-14 81.6 88 46.6
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 4.4e-14 81.3 88 46.6
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 9.8e-14 80.1 95 48.4
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.7e-13 79.3 84 45.2
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 2.2e-13 79.0 91 44.0
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 8.3e-13 77.0 63 55.6
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.8e-12 75.9 89 40.4
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 3.1e-12 75.1 57 61.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 1.6e-11 72.8 90 42.2
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 3.5e-11 71.6 79 45.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.0e-10 70.1 88 42.0
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.0e-10 70.1 88 42.0
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 8.6e-10 67.0 88 42.0
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 8.6e-10 67.0 88 42.0
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 8.6e-10 67.0 63 50.8
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 8.6e-10 67.0 63 50.8
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.5e-09 66.2 90 36.7
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 8.0e-08 60.5 88 38.6
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.4e-06 54.7 96 32.3


User provided reference genes

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