Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.3e-35 152.5 78 100.0
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 7.5e-31 136.7 78 89.7
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 1.3e-30 136.0 78 88.5
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.4e-29 131.7 68 98.5
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 3.1e-29 131.3 68 98.5
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 7.0e-29 130.2 69 95.7
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.2e-28 129.4 78 80.8
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.2e-28 129.4 78 80.8
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 3.5e-28 127.9 78 80.8
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 4.5e-28 127.5 78 83.3
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 7.7e-28 126.7 78 76.9
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 1.0e-27 126.3 78 82.1
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 1.0e-27 126.3 78 85.9
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 1.3e-27 125.9 77 76.6
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 5.0e-27 124.0 80 77.5
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 3.2e-26 121.3 78 79.5
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 4.2e-26 120.9 78 76.9
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 5.5e-26 120.6 77 80.5
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 9.4e-26 119.8 78 74.4
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 1.2e-25 119.4 76 80.3
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 1.6e-25 119.0 78 80.8
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 1.6e-25 119.0 78 75.6
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 2.1e-25 118.6 77 76.6
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 3.6e-25 117.9 77 79.2
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 3.6e-25 117.9 80 75.0
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 4.7e-25 117.5 78 79.5
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 4.7e-25 117.5 78 79.5
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 6.1e-25 117.1 75 80.0
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 8.0e-25 116.7 78 76.9
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 1.0e-24 116.3 71 78.9
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 1.4e-24 115.9 78 78.2
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 1.8e-24 115.5 78 78.2
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 1.8e-24 115.5 78 78.2
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 1.8e-24 115.5 75 78.7
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 2.3e-24 115.2 77 72.7
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 2.3e-24 115.2 68 83.8
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 3.0e-24 114.8 69 81.2
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 5.2e-24 114.0 75 80.0
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 5.2e-24 114.0 80 73.8
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 6.8e-24 113.6 72 77.8
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 6.8e-24 113.6 80 71.2
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 8.8e-24 113.2 72 77.8
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 1.5e-23 112.5 78 75.6
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 1.5e-23 112.5 68 80.9
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 2.0e-23 112.1 72 75.0
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 2.6e-23 111.7 68 77.9
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 4.4e-23 110.9 65 84.6
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 5.7e-23 110.5 68 76.5
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 1.7e-22 109.0 65 83.1
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 1.7e-22 109.0 77 68.8
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 2.8e-22 108.2 68 77.9
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 2.8e-22 108.2 68 76.5
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 3.7e-22 107.8 77 68.8
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 8.3e-22 106.7 71 71.8
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 1.8e-21 105.5 66 78.8
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 7.0e-21 103.6 61 78.7
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 9.1e-21 103.2 78 67.9
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 9.1e-21 103.2 68 76.5
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 1.6e-20 102.4 70 74.3
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 2.7e-20 101.7 59 81.4
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 3.5e-20 101.3 71 76.1
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 7.7e-20 100.1 66 77.3
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 1.7e-19 99.0 68 75.0
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 2.3e-19 98.6 69 76.8
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 2.3e-19 98.6 72 68.1
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 1.9e-18 95.5 73 65.8
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 3.3e-18 94.7 67 76.1
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 4.2e-18 94.4 78 64.1
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 4.2e-18 94.4 73 64.4
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 5.5e-18 94.0 71 69.0
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 5.5e-18 94.0 78 59.0
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 7.2e-18 93.6 74 62.2
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 7.2e-18 93.6 69 71.0
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 7.2e-18 93.6 69 71.0
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 1.6e-17 92.4 67 67.2
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 2.1e-17 92.0 67 71.6
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 2.1e-17 92.0 67 71.6
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 2.1e-17 92.0 67 71.6
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 2.1e-17 92.0 56 78.6
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 3.6e-17 91.3 72 66.7
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 3.6e-17 91.3 67 71.6
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 4.7e-17 90.9 74 62.2
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 6.1e-17 90.5 68 69.1
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 8.0e-17 90.1 71 59.2
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 1.4e-16 89.4 77 55.8
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 1.4e-16 89.4 81 58.0
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 3.0e-16 88.2 74 67.6
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 5.2e-16 87.4 68 67.6
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 6.8e-16 87.0 59 71.2
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 6.8e-16 87.0 54 77.8
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 3.4e-15 84.7 68 63.2
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 4.4e-15 84.3 68 63.2
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 4.4e-15 84.3 68 63.2
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 7.5e-15 83.6 70 62.9
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 2.9e-14 81.6 68 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 4.9e-14 80.9 63 61.9
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 6.3e-14 80.5 73 53.4
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 2.3e-11 72.0 64 53.1
MBI01_g34140_MAGBIO Magnolia biondii HOM05D007420 ORTHO05D009353 1.9e-10 68.9 45 68.9
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 5.6e-10 67.4 43 79.1
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 1.2e-09 66.2 82 47.6
Eucgr.C01292 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.8e-08 62.4 30 100.0
Glyma.13G033951 Glycine max HOM05D007420 ORTHO05D009353 6.8e-08 60.5 38 71.1


User provided reference genes

Program Settings