Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 8.1e-49 196.8 104 100.0
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 2.1e-25 119.0 71 83.1
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 8.2e-25 117.1 70 85.7
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 8.2e-25 117.1 70 80.0
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.1e-24 116.7 81 80.2
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 2.4e-24 115.5 76 72.4
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.1e-24 114.8 71 76.1
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 5.3e-24 114.4 70 80.0
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 5.3e-24 114.4 70 81.4
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 6.9e-24 114.0 69 79.7
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.2e-23 113.2 70 82.9
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.4e-23 111.7 81 77.8
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 1.0e-22 110.2 70 74.3
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.0e-22 110.2 70 74.3
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.7e-22 109.4 68 77.9
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 3.8e-22 108.2 93 63.4
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 8.4e-22 107.1 90 63.3
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 2.5e-21 105.5 61 80.3
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.6e-20 102.8 61 77.0
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.6e-20 102.8 68 75.0
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 1.6e-20 102.8 79 68.4
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.1e-20 102.4 68 73.5
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 4.6e-20 101.3 70 68.6
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 7.9e-20 100.5 70 68.6
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 7.9e-20 100.5 70 68.6
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 7.9e-20 100.5 68 72.1
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.0e-19 100.1 69 71.0
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.0e-19 100.1 70 74.3
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.3e-19 99.8 69 71.0
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 1.8e-19 99.4 68 70.6
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 1.5e-18 96.3 70 65.7
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 2.5e-18 95.5 94 54.3
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.3e-18 94.7 67 71.6
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 9.7e-18 93.6 67 68.7
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.6e-17 92.8 67 70.1
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 1.6e-17 92.8 68 70.6
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.8e-17 91.3 68 69.1
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 6.3e-17 90.9 70 68.6
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 6.3e-17 90.9 70 68.6
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.1e-16 90.1 68 67.6
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.4e-16 89.7 60 75.0
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.4e-16 89.7 68 67.6
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.4e-16 89.7 70 65.7
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.4e-16 89.0 70 67.1
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 5.3e-16 87.8 66 59.1
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 6.9e-16 87.4 70 62.9
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 6.9e-16 87.4 70 61.4
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 1.5e-15 86.3 68 61.8
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 3.4e-15 85.1 68 60.3
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 2.2e-14 82.4 70 58.6
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 2.9e-14 82.0 68 61.8
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 5.0e-14 81.3 70 62.9
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 5.0e-14 81.3 70 62.9
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 6.5e-14 80.9 70 58.6
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 8.5e-14 80.5 61 67.2
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.5e-13 79.0 67 62.7
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 4.2e-13 78.2 70 57.1
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.6e-12 76.3 71 59.2
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 3.6e-12 75.1 65 58.5
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 6.1e-12 74.3 67 56.7
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 6.1e-12 74.3 70 54.3
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 7.9e-12 73.9 65 56.9
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 7.9e-12 73.9 74 62.2
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 2.3e-11 72.4 68 61.8
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 2.3e-11 72.4 70 55.7
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 3.0e-11 72.0 65 56.9
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 3.9e-11 71.6 70 51.4
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 5.1e-11 71.2 53 60.4
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 6.7e-11 70.9 71 53.5
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 6.7e-11 70.9 66 56.1
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 8.8e-11 70.5 71 53.5
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 2.5e-10 68.9 85 48.2
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 2.5e-10 68.9 60 56.7
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 5.7e-10 67.8 72 52.8
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 1.7e-09 66.2 65 55.4
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 4.8e-09 64.7 74 45.9
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 6.3e-09 64.3 70 48.6
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 8.2e-09 63.9 65 50.8
Medtr6g086730 Medicago truncatula HOM05D007950 ORTHO05D009951 3.1e-08 62.0 50 62.0
Thhalv10012203m.g Eutrema salsugineum HOM05D007950 ORTHO05D009951 5.9e-07 57.8 62 46.8


User provided reference genes

Program Settings