Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.9e-263 910.6 463 100.0
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 3.6e-205 718.4 441 81.9
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 6.1e-205 717.6 466 79.6
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 1.4e-201 706.4 467 76.9
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 3.1e-201 705.3 465 78.9
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.5e-200 703.0 465 78.3
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 2.0e-200 702.6 467 77.3
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 4.5e-200 701.4 465 78.7
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.0e-199 700.3 463 77.8
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 9.4e-198 693.7 433 79.2
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.6e-197 693.0 468 75.2
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 3.6e-197 691.8 466 76.4
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 1.4e-196 689.9 464 75.6
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.3e-196 689.1 407 82.1
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 3.0e-196 688.7 473 74.2
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.8e-194 682.2 467 73.7
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 3.1e-193 678.7 471 74.5
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 3.5e-192 675.2 473 75.5
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 2.2e-191 672.5 386 84.5
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 1.2e-189 666.8 386 83.7
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 2.1e-189 666.0 462 74.2
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 2.7e-189 665.6 464 74.1
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 3.6e-189 665.2 469 72.9
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 4.7e-189 664.8 405 80.0
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 6.1e-189 664.5 374 85.3
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 8.0e-189 664.1 471 72.8
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 1.4e-188 663.3 467 73.7
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.3e-188 662.5 462 74.7
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.0e-188 661.8 462 74.7
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 5.2e-188 661.4 466 72.7
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 6.8e-188 661.0 470 72.6
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 2.0e-187 659.4 463 73.9
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 4.8e-186 654.8 381 84.3
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 4.8e-186 654.8 465 73.3
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 2.4e-185 652.5 411 78.3
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 5.4e-185 651.4 469 72.1
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 5.4e-185 651.4 467 74.1
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 7.0e-185 651.0 452 73.7
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 2.0e-184 649.4 413 77.0
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 2.0e-184 649.4 429 76.0
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 2.7e-184 649.0 464 72.6
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 2.2e-183 646.0 466 71.0
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 5.0e-183 644.8 459 72.8
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 6.5e-183 644.4 440 73.6
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 1.1e-182 643.7 485 69.7
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 1.1e-182 643.7 429 75.5
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.5e-182 642.5 429 75.5
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 4.2e-182 641.7 426 75.6
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 5.5e-182 641.3 465 72.3
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 1.2e-181 640.2 463 71.9
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 1.2e-181 640.2 422 77.0
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 2.7e-181 639.0 381 81.1
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 2.7e-181 639.0 493 68.2
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 3.6e-181 638.6 458 72.9
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 6.1e-181 637.9 455 72.7
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.8e-180 636.3 455 72.5
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 1.8e-180 636.3 423 73.8
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 3.0e-180 635.6 466 72.3
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 9.8e-179 630.6 457 72.0
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 2.8e-178 629.0 456 71.9
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 6.3e-178 627.9 457 71.8
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 1.1e-177 627.1 458 71.8
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 1.4e-177 626.7 459 70.8
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 2.4e-177 625.9 461 70.9
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 2.0e-176 622.9 462 70.6
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 2.7e-176 622.5 424 72.4
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 5.9e-176 621.3 463 68.3
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.7e-175 619.8 404 76.0
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 2.3e-175 619.4 465 68.4
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 8.6e-175 617.5 422 73.9
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 8.6e-175 617.5 465 69.7
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 1.5e-174 616.7 460 68.3
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 4.3e-174 615.1 374 79.7
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 5.2e-172 608.2 446 69.5
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 8.9e-172 607.4 467 71.1
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 1.3e-170 603.6 465 68.8
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 4.9e-170 601.7 460 67.0
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 6.4e-170 601.3 456 70.0
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 8.3e-170 600.9 451 69.2
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 2.4e-169 599.4 472 65.5
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 4.1e-169 598.6 376 76.6
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 3.5e-168 595.5 450 67.8
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 3.5e-168 595.5 425 69.9
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 4.6e-168 595.1 416 71.9
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 1.3e-167 593.6 469 65.7
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 1.7e-167 593.2 465 66.2
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 9.5e-166 587.4 468 64.7
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 4.7e-165 585.1 462 66.0
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.0e-164 583.9 468 63.9
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.4e-164 583.6 455 66.4
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 1.8e-164 583.2 475 63.4
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 1.8e-164 583.2 468 63.7
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 1.8e-164 583.2 468 63.7
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 3.1e-164 582.4 465 65.2
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 1.2e-163 580.5 474 63.9
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 1.2e-163 580.5 474 63.9
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 1.4e-153 547.0 315 83.8
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 3.2e-153 545.8 465 60.4
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 8.1e-149 531.2 425 63.5
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 4.4e-147 525.4 345 75.9
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 7.6e-147 524.6 470 57.9
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 1.6e-144 516.9 396 64.4
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.7e-144 516.2 382 72.5
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 1.1e-116 424.5 354 61.3
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.3e-111 406.8 271 75.6
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 2.2e-106 390.2 392 50.8
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.9e-106 389.8 374 53.2
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 1.8e-103 380.6 404 48.0
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 3.9e-103 379.4 362 53.3
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 5.9e-99 365.5 447 48.1
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.5e-97 360.1 372 50.3
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 2.2e-82 310.5 344 46.8
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.5e-81 307.8 320 50.0
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.2e-78 298.1 383 46.5
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.7e-59 233.8 138 78.3
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 4.6e-51 206.5 313 44.7
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.3e-42 178.3 104 82.7
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 2.5e-41 174.1 99 78.8
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.6e-34 149.4 83 88.0
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.3e-33 147.1 83 86.7
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 7.1e-28 129.4 89 73.0
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 1.6e-27 128.3 141 59.6
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.3e-26 124.4 304 31.9
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.0e-26 124.0 73 82.2
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 3.9e-26 123.6 83 77.1
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 3.9e-26 123.6 261 33.3
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 3.6e-24 117.1 414 29.0
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.3e-20 102.4 137 50.4
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 5.3e-15 86.7 125 42.4
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.0e-15 85.9 73 63.0
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.6e-14 84.3 128 46.1
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 6.2e-08 63.2 58 56.9


User provided reference genes

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