Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01025 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.8e-51 204.9 99 100.0
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.0e-42 173.7 99 85.9
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.6e-31 137.5 92 72.8
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.6e-30 136.0 92 72.8
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.6e-30 136.0 92 72.8
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-30 135.6 75 85.3
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.8e-30 135.2 73 87.7
Eucgr.B01060 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.1e-30 134.0 98 68.4
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-29 132.9 75 84.0
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-29 132.5 75 84.0
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-28 129.0 75 82.7
Eucgr.B01204 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.7e-28 127.5 69 88.4
Eucgr.A00957 Eucalyptus grandis HOM05D007774 ORTHO05D000309 1.2e-25 119.8 83 71.1
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.9e-25 117.5 75 76.0
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.8e-25 117.1 75 76.0
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.8e-25 117.1 75 73.3
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-24 116.3 78 73.1
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-24 116.3 75 73.3
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-24 116.3 75 73.3
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.3e-24 115.5 75 74.7
Eucgr.H02949 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.5e-23 112.1 72 75.0
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.3e-23 111.3 75 72.0
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.1e-21 105.1 60 76.7
Eucgr.B01616 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-20 102.4 75 61.3
Eucgr.D01113 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.8e-20 100.9 75 61.3
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.7e-19 99.4 75 57.3
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.9e-19 98.6 75 60.0
Eucgr.L01275 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.4e-19 97.4 72 62.5
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.9e-18 95.9 59 69.5
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.2e-18 95.1 75 60.0
Eucgr.H02800 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.4e-18 94.4 69 59.4
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.2e-18 93.6 75 54.7
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-09 65.1 72 45.8
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 7.8e-09 63.9 55 52.7
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 3.0e-08 62.0 85 35.3
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 3.0e-08 62.0 85 35.3
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-08 61.6 61 45.9
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-08 61.6 61 45.9
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 5.1e-08 61.2 98 34.7
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 6.6e-08 60.8 60 50.0
Eucgr.J01243 Eucalyptus grandis HOM05D015495 ORTHO05D000309 6.6e-08 60.8 88 36.4
Eucgr.H03328 Eucalyptus grandis HOM05D015495 ORTHO05D000309 8.6e-08 60.5 98 34.7
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 1.5e-07 59.7 67 41.8
SalBow5G2244 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.5e-07 59.7 61 44.3
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-07 58.9 72 43.1
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-07 58.9 54 46.3
Medtr1g039350 Medicago truncatula HOM05D001383 ORTHO05D000309 2.5e-07 58.9 81 35.8
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.3e-07 58.2 50 50.0
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-07 57.8 50 50.0
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-07 57.8 50 50.0
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 7.3e-07 57.4 72 41.7
QL08p000935 Quercus lobata HOM05D022142 ORTHO05D000309 7.3e-07 57.4 74 37.8
Eucgr.C01594 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.5e-07 57.0 88 34.1
SalBow6G0195 Salvia bowleyana HOM05D008544 ORTHO05D010680 9.5e-07 57.0 48 54.2
SalBow7G1419 Salvia bowleyana HOM05D008544 ORTHO05D010680 9.5e-07 57.0 48 54.2
SalBow7G2169 Salvia bowleyana HOM05D008544 ORTHO05D010680 9.5e-07 57.0 48 54.2
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.2e-06 56.6 43 58.1
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-06 56.6 53 49.1
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 1.2e-06 56.6 51 47.1
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 56.6 55 43.6
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-06 56.2 72 40.3
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 1.6e-06 56.2 72 40.3
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 1.6e-06 56.2 63 44.4
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 1.6e-06 56.2 67 40.3
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 56.2 55 43.6
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.6e-06 56.2 50 48.0
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-06 55.8 67 40.3
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-06 55.8 62 41.9
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.1e-06 55.8 49 49.0
COL.COLO4_33074 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.1e-06 55.8 59 45.8
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 2.1e-06 55.8 78 38.5
Hma1.2p1_0012F.1_g007370 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-06 55.8 54 46.3
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 66 39.4
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-06 55.5 64 43.8
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 2.8e-06 55.5 72 38.9
Cfa010532 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.8e-06 55.5 73 42.5
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 2.8e-06 55.5 57 49.1
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.8e-06 55.5 46 52.2
QL08p000859 Quercus lobata HOM05D022142 ORTHO05D000309 2.8e-06 55.5 66 40.9
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-06 55.1 39 53.8
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-06 55.1 39 53.8
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-06 55.1 39 53.8
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-06 55.1 39 53.8
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-06 55.1 39 53.8
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.6e-06 55.1 73 41.1
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.6e-06 55.1 78 38.5
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.6e-06 55.1 78 38.5
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 3.6e-06 55.1 66 42.4
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-06 54.7 40 52.5
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-06 54.7 40 52.5
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 4.7e-06 54.7 55 45.5
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 4.7e-06 54.7 59 45.8
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.7e-06 54.7 55 43.6
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 4.7e-06 54.7 75 30.7
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 6.2e-06 54.3 43 55.8
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 6.2e-06 54.3 43 55.8
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-06 54.3 57 49.1
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 8.1e-06 53.9 39 53.8
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 8.1e-06 53.9 73 39.7
Dinv12298 Davidia involucrata HOM05D001383 ORTHO05D000309 8.1e-06 53.9 84 38.1
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 8.1e-06 53.9 87 35.6
Psat0s2572g0080 Pisum sativum HOM05D018012 ORTHO05D000309 8.1e-06 53.9 67 41.8
SGA_v2.0_scaffold18G08221 Striga asiatica HOM05D012189 ORTHO05D000309 8.1e-06 53.9 83 37.3


User provided reference genes

Program Settings