Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.3e-116 420.2 215 100.0
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.5e-109 397.5 215 96.3
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.5e-97 359.0 200 93.5
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.1e-95 353.6 209 84.7
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.4e-95 353.2 213 84.5
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.6e-94 349.0 211 82.9
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 4.5e-94 348.2 210 83.3
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.0e-93 347.1 212 82.1
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.8e-93 345.1 212 81.6
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 6.5e-93 344.4 210 82.4
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.5e-93 344.0 212 82.5
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.5e-92 342.4 212 82.1
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.2e-92 342.0 212 82.1
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 4.2e-92 341.7 210 81.0
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 9.4e-92 340.5 210 81.4
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.1e-91 339.3 208 82.7
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.7e-91 339.0 210 82.4
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 4.7e-91 338.2 215 79.5
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.1e-91 337.8 212 79.7
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 6.1e-91 337.8 210 81.4
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.0e-90 337.0 210 81.9
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.4e-90 336.7 208 81.7
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.8e-90 336.3 209 79.9
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.8e-90 336.3 209 78.9
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 2.3e-90 335.9 209 81.3
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.9e-90 335.1 214 78.0
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.9e-90 335.1 214 78.0
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 3.9e-90 335.1 209 78.5
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 5.1e-90 334.7 209 79.9
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 6.7e-90 334.3 212 79.7
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.1e-89 333.6 212 77.8
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.1e-89 333.6 210 79.5
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.5e-89 333.2 209 79.4
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.5e-89 333.2 210 79.5
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 2.0e-89 332.8 211 78.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 3.3e-89 332.0 212 77.8
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 4.4e-89 331.6 211 77.7
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 5.7e-89 331.3 240 72.9
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 5.7e-89 331.3 240 72.9
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 7.4e-89 330.9 212 77.8
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 7.4e-89 330.9 209 79.9
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 7.4e-89 330.9 209 79.9
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 9.7e-89 330.5 210 79.5
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 9.7e-89 330.5 209 78.5
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 9.7e-89 330.5 208 78.4
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.7e-88 329.7 214 77.1
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 2.8e-88 328.9 210 80.0
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.7e-88 328.6 212 78.3
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 3.7e-88 328.6 212 76.9
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.7e-88 328.6 210 78.1
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.8e-88 328.2 208 78.8
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 4.8e-88 328.2 208 78.4
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 4.8e-88 328.2 223 76.2
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.1e-87 327.0 210 78.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.1e-87 327.0 210 78.1
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.1e-87 327.0 214 74.8
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.8e-87 326.2 211 75.8
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 2.4e-87 325.9 197 82.7
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 3.1e-87 325.5 210 77.6
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 4.1e-87 325.1 210 76.2
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 5.3e-87 324.7 208 78.4
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 5.3e-87 324.7 211 74.9
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 7.0e-87 324.3 211 76.3
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 7.0e-87 324.3 211 76.3
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.2e-86 323.6 211 75.4
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.2e-86 323.6 211 75.8
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.0e-86 322.8 208 78.8
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 3.5e-86 322.0 211 74.9
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 5.9e-86 321.2 210 75.2
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 5.9e-86 321.2 202 79.7
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.7e-85 319.7 211 74.4
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.9e-85 318.9 197 83.2
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 6.5e-85 317.8 194 79.9
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.9e-84 316.2 209 76.1
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 4.2e-84 315.1 209 75.6
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 4.2e-84 315.1 210 80.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 7.2e-84 314.3 201 77.1
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.2e-83 313.5 194 79.9
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.6e-83 312.0 197 78.2
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 6.1e-83 311.2 208 75.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.4e-82 310.1 237 67.9
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 5.2e-82 308.1 235 68.1
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 6.7e-82 307.8 207 75.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 5.3e-79 298.1 212 74.5
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 9.1e-79 297.4 196 74.0
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.6e-78 296.6 210 73.3
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.5e-78 295.4 210 74.3
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 7.2e-76 287.7 184 77.7
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 9.8e-73 277.3 198 73.7
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.0e-71 271.2 171 82.5
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.6e-70 270.0 207 65.2
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 2.7e-70 269.2 208 65.9
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.7e-70 269.2 215 66.5
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.5e-68 263.5 210 68.6
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 5.5e-68 261.5 199 70.9
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 7.2e-68 261.2 208 64.4
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.2e-67 260.4 208 64.4
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.4e-66 256.9 174 77.0
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 6.8e-66 254.6 224 63.8
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.8e-63 246.5 155 84.5
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.0e-61 240.7 174 72.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 1.1e-60 237.3 207 62.3
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.2e-59 233.8 137 88.3
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.8e-58 229.9 146 77.4
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.9e-52 209.9 136 78.7
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.6e-46 188.7 184 58.7
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 7.8e-46 188.0 113 80.5
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-42 177.6 120 73.3
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 4.4e-41 172.2 133 69.9
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.8e-35 152.9 136 64.7
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-34 151.0 108 69.4
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 6.8e-34 148.3 115 67.0
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.5e-28 130.6 85 70.6
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 3.6e-27 125.9 205 35.6
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.7e-27 125.6 210 37.6
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.5e-25 120.6 198 35.4
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 5.8e-25 118.6 101 63.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 9.9e-25 117.9 101 62.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 3.5e-22 109.4 88 72.7
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 1.3e-19 100.9 111 55.0
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 4.9e-16 89.0 69 56.5
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 9.3e-15 84.7 41 85.4


User provided reference genes

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