Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 3.5e-120 434.9 207 100.0
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 3.2e-81 305.4 205 69.8
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 6.7e-79 297.7 206 68.4
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 3.3e-78 295.4 205 67.8
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.7e-77 293.1 211 66.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.2e-77 292.7 203 66.0
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 2.8e-77 292.4 203 66.5
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.7e-77 292.0 207 66.2
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 8.2e-77 290.8 205 66.3
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 5.3e-76 288.1 205 68.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 9.1e-76 287.3 206 64.6
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.5e-75 286.6 203 65.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.6e-75 285.8 203 66.0
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 5.9e-75 284.6 205 68.3
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.0e-74 283.9 203 65.0
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 5.0e-74 281.6 205 64.9
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 8.5e-74 280.8 205 63.9
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 8.5e-74 280.8 210 64.8
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 1.4e-73 280.0 205 65.9
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.2e-73 277.7 205 63.9
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 9.4e-73 277.3 205 62.9
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.2e-72 276.9 205 63.9
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.2e-72 276.9 205 63.9
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.6e-72 276.6 203 64.5
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.6e-72 276.6 207 62.3
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.6e-72 276.6 207 62.3
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.6e-72 275.4 220 63.6
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 3.6e-72 275.4 207 61.4
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 3.6e-72 275.4 206 64.1
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 6.1e-72 274.6 207 61.8
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 5.2e-71 271.6 205 62.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.7e-71 271.2 191 65.4
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 1.1e-70 270.4 245 54.3
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 2.6e-70 269.2 205 62.4
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 3.3e-70 268.9 205 61.5
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 4.4e-70 268.5 212 60.4
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 9.7e-70 267.3 218 59.2
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 9.7e-70 267.3 218 58.7
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 3.7e-69 265.4 205 62.4
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 6.3e-69 264.6 203 62.6
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 8.2e-69 264.2 211 58.8
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.1e-68 263.8 203 61.1
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.8e-68 263.1 205 62.4
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.8e-68 263.1 203 63.1
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.4e-68 262.7 207 59.9
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 4.1e-68 261.9 203 61.6
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 7.0e-68 261.2 203 62.1
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 7.0e-68 261.2 205 61.0
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.2e-67 260.4 203 61.1
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.2e-67 260.4 224 56.7
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 2.6e-67 259.2 203 60.6
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 3.5e-67 258.8 204 60.8
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.5e-67 258.8 205 58.5
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 3.5e-67 258.8 205 62.4
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 4.5e-67 258.5 205 60.5
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 4.5e-67 258.5 204 59.8
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 5.9e-67 258.1 205 60.0
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.0e-66 257.3 205 60.5
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.3e-66 256.9 203 60.6
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.3e-66 256.9 203 60.6
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.3e-66 256.9 180 67.2
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.7e-66 256.5 200 59.5
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 2.2e-66 256.1 203 60.1
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.9e-66 255.8 205 57.6
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 6.5e-66 254.6 205 59.5
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.9e-65 253.1 206 59.2
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 3.2e-65 252.3 204 61.3
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 3.2e-65 252.3 205 58.5
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.6e-64 250.0 203 60.6
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 6.1e-64 248.1 203 58.1
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 1.0e-63 247.3 205 57.6
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.8e-63 246.5 203 57.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.2e-62 243.8 205 56.6
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 7.5e-62 241.1 205 57.6
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 9.7e-62 240.7 205 56.1
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 2.2e-61 239.6 203 59.1
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 2.2e-61 239.6 205 55.1
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.4e-60 236.9 207 55.1
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 1.6e-59 233.4 205 56.1
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.7e-59 232.6 198 55.6
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 9.4e-57 224.2 202 54.0
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.6e-56 223.4 233 51.5
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.3e-55 219.5 194 55.7
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.0e-51 206.5 137 62.8
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 4.5e-51 205.3 165 57.6
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.8e-50 202.2 170 56.5
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 5.0e-50 201.8 142 62.7
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 2.3e-47 193.0 206 49.0
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 4.4e-46 188.7 148 56.8
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.2e-45 186.4 226 47.3
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 2.0e-43 179.9 167 53.9
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 7.8e-43 177.9 197 49.2
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.0e-42 177.6 155 58.7
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.4e-38 162.2 170 50.0
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.4e-38 162.2 172 48.8
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.5e-33 144.4 131 51.1
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.8e-32 142.9 119 53.8
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 2.3e-31 139.8 106 57.5
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 3.0e-26 122.9 115 47.0
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 6.6e-26 121.7 167 38.9
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 4.7e-24 115.5 69 72.5
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 1.4e-23 114.0 108 54.6
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.3e-23 113.2 178 35.4
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.6e-22 109.8 93 61.3
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 3.9e-18 95.9 56 73.2
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.6e-18 95.1 81 59.3
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.9e-17 93.6 168 33.9
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 8.9e-15 84.7 50 70.0
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 5.4e-12 75.5 91 46.2
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 2.3e-10 70.1 59 61.0
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.1e-08 63.5 81 49.4
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.1e-07 61.2 45 53.3
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 1.8e-07 60.5 31 67.7
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 4.0e-07 59.3 34 67.6
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 3.4e-06 56.2 45 55.6
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 4.4e-06 55.8 95 43.2


User provided reference genes

Program Settings