Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 5.5e-59 230.7 112 100.0
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 6.9e-46 187.2 110 79.1
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.4e-43 179.5 110 73.6
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.2e-42 176.4 110 76.4
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.0e-41 173.3 110 70.9
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.1e-40 169.9 109 69.7
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.5e-40 169.5 108 70.4
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.9e-40 169.1 110 69.1
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.9e-40 169.1 110 68.2
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 7.4e-40 167.2 111 69.4
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 9.7e-40 166.8 111 69.4
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 9.7e-40 166.8 109 72.5
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 4.8e-39 164.5 109 71.6
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 6.3e-39 164.1 108 72.2
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 1.1e-38 163.3 108 70.4
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 5.3e-38 161.0 109 66.1
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 6.9e-38 160.6 109 66.1
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.0e-37 159.1 109 68.8
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.0e-37 159.1 112 67.0
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 2.6e-37 158.7 108 69.4
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 4.5e-37 157.9 108 65.7
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 5.9e-37 157.5 109 67.9
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 7.7e-37 157.1 107 64.5
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.0e-36 156.8 110 66.4
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.0e-36 156.8 110 66.4
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.0e-36 156.8 108 70.4
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.3e-36 156.4 108 65.7
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 2.9e-36 155.2 109 63.3
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 5.0e-36 154.5 110 65.5
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 5.0e-36 154.5 107 64.5
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 6.5e-36 154.1 108 63.9
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 8.5e-36 153.7 109 63.3
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 1.1e-35 153.3 111 64.9
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.4e-35 152.9 109 58.7
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.4e-35 152.9 109 62.4
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.9e-35 152.5 99 70.7
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 7.2e-35 150.6 111 63.1
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 9.4e-35 150.2 107 61.7
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 1.2e-34 149.8 111 63.1
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 2.7e-34 148.7 108 62.0
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 4.7e-34 147.9 108 62.0
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 4.7e-34 147.9 109 59.6
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.8e-33 146.0 109 65.1
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.8e-33 146.0 108 62.0
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 3.9e-33 144.8 112 62.5
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 6.7e-33 144.1 109 64.2
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 2.0e-32 142.5 110 63.6
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.0e-32 142.5 109 56.9
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 3.3e-32 141.7 109 57.8
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 5.7e-32 141.0 108 63.0
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 5.7e-32 141.0 109 60.6
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 9.7e-32 140.2 109 60.6
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.7e-31 139.4 111 63.1
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.7e-31 139.4 111 63.1
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.7e-31 139.4 110 63.6
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 2.2e-31 139.0 105 60.0
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 2.2e-31 139.0 113 61.9
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.2e-31 139.0 112 59.8
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 3.7e-31 138.3 109 56.0
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 3.7e-31 138.3 108 64.8
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 4.8e-31 137.9 108 64.8
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 8.2e-31 137.1 109 59.6
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.4e-30 136.3 108 63.9
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 1.4e-30 136.3 111 59.5
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.3e-30 134.4 99 64.6
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 9.1e-30 133.7 108 60.2
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.5e-29 132.9 110 57.3
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.0e-29 132.5 108 59.3
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 3.4e-29 131.7 108 62.0
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 7.7e-29 130.6 108 61.1
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 7.7e-29 130.6 107 58.9
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.0e-28 130.2 110 56.4
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-28 129.8 85 69.4
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 1.7e-28 129.4 107 60.7
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 3.8e-28 128.3 110 55.5
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 5.0e-28 127.9 111 59.5
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.9e-27 125.9 110 59.1
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 4.2e-27 124.8 110 52.7
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 5.5e-27 124.4 110 52.7
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 5.5e-27 124.4 110 52.7
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 7.2e-27 124.0 111 55.0
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 9.4e-27 123.6 109 56.9
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.2e-26 123.2 110 51.8
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.2e-26 123.2 110 51.8
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 2.7e-26 122.1 110 52.7
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 2.7e-26 122.1 110 52.7
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 8.8e-25 117.1 70 75.7
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 5.7e-24 114.4 110 50.9
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 7.4e-24 114.0 103 51.5
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 2.2e-23 112.5 110 50.0
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.1e-22 110.2 118 49.2
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 7.0e-22 107.5 108 49.1
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.6e-21 106.3 110 55.5
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 2.0e-21 105.9 109 53.2
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 5.9e-21 104.4 73 69.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.7e-20 102.8 73 69.9
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 8.5e-20 100.5 109 46.8
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 5.5e-19 97.8 112 43.8
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 3.6e-18 95.1 69 62.3
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 4.7e-18 94.7 64 71.9
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 3.3e-16 88.6 107 39.3
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.7e-15 86.3 108 40.7
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 7.0e-14 80.9 108 40.7
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 9.4e-11 70.5 37 91.9
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 3.7e-07 58.5 51 56.9
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 1.1e-06 57.0 64 42.2
VMungo1080G1538 Vigna mungo HOM05D000002 ORTHO05D000001 1.8e-06 56.2 48 45.8


User provided reference genes

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