Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 1.2e-216 756.1 362 100.0
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 3.5e-131 472.2 336 69.0
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.5e-115 419.1 362 60.5
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 6.0e-115 418.3 370 59.5
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.0e-114 417.5 337 62.6
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 6.6e-114 414.8 336 65.2
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 6.6e-114 414.8 370 58.9
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 1.5e-113 413.7 378 57.7
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 2.5e-113 412.9 294 70.1
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 3.3e-113 412.5 339 61.7
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 1.6e-112 410.2 332 64.8
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 5.2e-111 405.2 353 60.3
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.5e-110 403.7 370 59.2
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 3.4e-110 402.5 367 60.2
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 4.4e-110 402.1 345 61.2
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 5.4e-108 395.2 297 64.3
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.2e-107 394.0 302 64.9
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 1.6e-107 393.7 334 59.6
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.6e-107 393.7 381 57.7
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.6e-107 393.7 302 64.6
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 2.7e-107 392.9 341 59.5
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 6.0e-107 391.7 212 84.4
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.7e-106 390.2 379 56.2
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 3.0e-106 389.4 293 64.8
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 3.9e-106 389.0 293 64.8
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 3.9e-106 389.0 337 59.3
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 3.9e-106 389.0 372 55.9
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 5.1e-106 388.7 295 65.8
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 6.6e-106 388.3 222 79.3
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 8.6e-106 387.9 332 59.6
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 8.6e-106 387.9 343 59.5
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 8.6e-106 387.9 257 72.4
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 1.1e-105 387.5 349 59.0
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.1e-105 387.5 230 79.6
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.1e-105 387.5 336 59.8
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 2.5e-105 386.3 309 63.4
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 5.6e-105 385.2 338 60.1
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 1.2e-104 384.0 370 56.5
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.6e-104 383.6 214 80.8
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.8e-104 382.9 380 56.6
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 3.6e-104 382.5 348 58.6
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 3.6e-104 382.5 293 64.5
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 3.6e-104 382.5 340 58.5
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 8.1e-104 381.3 359 57.4
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 8.1e-104 381.3 322 61.5
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.1e-103 380.9 289 66.4
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.1e-103 380.9 212 81.1
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.4e-103 380.6 293 64.2
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.8e-103 380.2 323 61.6
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.8e-103 380.2 289 66.4
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 2.3e-103 379.8 214 79.4
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.3e-103 379.8 348 56.9
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 3.1e-103 379.4 290 65.2
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 3.1e-103 379.4 290 65.2
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 3.1e-103 379.4 237 75.1
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 5.2e-103 378.6 300 64.0
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 6.8e-103 378.3 227 78.4
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 8.9e-103 377.9 336 58.0
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 1.5e-102 377.1 287 64.1
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 2.0e-102 376.7 380 55.3
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 2.0e-102 376.7 288 65.3
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 3.4e-102 375.9 226 77.9
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 3.4e-102 375.9 294 66.0
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 5.8e-102 375.2 286 63.6
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 5.8e-102 375.2 290 62.1
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 9.9e-102 374.4 330 57.3
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 1.7e-101 373.6 347 55.6
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.7e-101 373.6 230 77.0
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 3.8e-101 372.5 281 64.4
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 3.8e-101 372.5 243 73.3
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 6.4e-101 371.7 282 64.2
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 1.4e-100 370.5 290 62.1
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 1.4e-100 370.5 303 62.0
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.9e-100 370.2 288 61.8
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.9e-100 370.2 288 61.8
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.9e-100 370.2 282 64.5
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.4e-100 369.8 280 65.4
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 3.2e-100 369.4 232 75.0
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 5.4e-100 368.6 228 76.8
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 7.1e-100 368.2 230 76.1
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.2e-99 367.5 234 73.1
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 1.6e-99 367.1 322 60.2
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 2.1e-99 366.7 321 58.9
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 2.7e-99 366.3 288 62.5
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 6.0e-99 365.2 322 59.9
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.3e-98 364.0 322 59.9
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.7e-98 363.6 348 56.6
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 2.3e-98 363.2 286 62.2
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 2.3e-98 363.2 293 60.8
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 8.6e-98 361.3 217 76.5
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 8.6e-98 361.3 229 73.4
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.1e-97 360.9 228 75.0
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.1e-97 360.9 275 63.3
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 2.5e-97 359.8 229 72.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 2.5e-97 359.8 225 73.3
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 3.3e-97 359.4 293 61.8
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 4.3e-97 359.0 241 71.0
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 5.6e-97 358.6 233 73.0
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 9.6e-97 357.8 221 75.1
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.6e-96 357.1 293 61.4
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 2.1e-96 356.7 238 68.9
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 2.8e-96 356.3 274 65.7
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 4.4e-94 349.0 220 73.6
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 7.6e-94 348.2 195 81.0
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 7.6e-94 348.2 255 64.7
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 9.9e-94 347.8 301 58.5
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 1.9e-92 343.6 282 57.8
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.9e-92 343.6 298 58.4
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 9.3e-92 341.3 200 75.0
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 3.5e-91 339.3 277 57.0
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.7e-90 337.0 233 67.4
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.1e-89 334.3 266 62.0
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.1e-89 334.3 233 67.0
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.5e-89 333.2 278 56.8
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 1.4e-87 327.4 212 69.3
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.8e-86 322.0 297 53.9
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 2.4e-84 316.6 222 68.5
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 7.4e-81 305.1 237 59.9
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.5e-78 297.4 162 79.6
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.9e-73 280.4 161 75.8
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.3e-72 277.7 249 58.2
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 4.8e-72 275.8 267 54.7
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 4.8e-72 275.8 203 61.6
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 8.2e-72 275.0 201 59.7
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.1e-71 273.1 161 75.2
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 1.5e-70 270.8 228 61.0
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 2.1e-67 260.4 145 81.4
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 6.7e-66 255.4 150 74.7
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 5.1e-58 229.2 211 51.2
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 6.5e-53 212.2 121 75.2
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.0e-49 200.7 148 64.9
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 3.8e-45 186.4 156 58.3
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 6.5e-45 185.7 200 44.0
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 7.0e-31 139.0 148 44.6
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 5.4e-23 112.8 83 56.6
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 7.7e-22 109.0 99 56.6
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 6.5e-21 105.9 142 45.8
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 8.0e-19 99.0 198 37.9
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.2e-18 96.3 116 49.1
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.5e-17 94.7 73 67.1
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.5e-17 94.7 142 42.3
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 1.3e-16 91.7 61 73.8
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 1.8e-10 71.2 43 74.4
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 4.9e-08 63.2 33 75.8
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 2.7e-06 57.4 37 70.3


User provided reference genes

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