Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 3.7e-165 584.7 281 100.0
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 8.5e-109 397.5 281 69.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.2e-107 393.7 281 68.0
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 5.1e-106 388.3 280 69.6
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 1.5e-105 386.7 282 68.4
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 3.7e-104 382.1 281 70.1
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 3.7e-104 382.1 281 70.1
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 6.9e-103 377.9 280 66.8
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 2.0e-102 376.3 281 66.9
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 3.4e-102 375.6 283 66.1
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 1.0e-101 374.0 279 66.7
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 2.2e-101 372.9 282 66.7
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 3.8e-101 372.1 284 67.3
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 6.5e-101 371.3 281 66.2
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 6.5e-101 371.3 281 66.5
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.1e-100 370.5 282 66.3
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.4e-100 370.2 282 65.6
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.4e-100 370.2 282 65.6
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.9e-100 369.8 281 65.8
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 3.2e-100 369.0 281 65.1
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 4.2e-100 368.6 281 68.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 5.5e-100 368.2 281 66.9
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 5.5e-100 368.2 279 65.6
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 1.2e-99 367.1 282 66.3
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 6.1e-99 364.8 279 65.6
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.3e-98 362.8 281 66.9
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 8.8e-98 360.9 280 64.6
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 8.8e-98 360.9 278 66.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 7.4e-97 357.8 282 63.8
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 4.8e-96 355.1 282 64.2
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.8e-95 353.2 281 63.7
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 2.0e-94 349.7 278 64.4
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.4e-94 349.0 280 63.2
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.0e-93 347.4 281 63.0
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 3.8e-93 345.5 284 63.0
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.8e-90 336.7 281 63.3
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 3.0e-90 335.9 281 60.1
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 6.7e-90 334.7 283 59.4
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.3e-88 330.5 279 60.6
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 1.4e-87 327.0 278 60.4
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 5.3e-87 325.1 286 57.3
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 7.0e-87 324.7 282 60.6
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.1e-87 324.3 280 58.9
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.6e-86 322.8 280 58.9
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 1.7e-85 320.1 277 58.8
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 3.2e-84 315.8 281 58.7
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.2e-84 315.8 287 54.7
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 7.2e-84 314.7 293 56.7
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 9.4e-84 314.3 260 63.8
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 1.6e-83 313.5 280 57.5
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-83 313.5 280 57.5
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 2.1e-83 313.2 282 59.9
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 6.1e-83 311.6 279 56.6
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 8.0e-83 311.2 286 55.9
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 1.8e-82 310.1 285 55.8
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 2.3e-82 309.7 282 57.1
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 6.7e-82 308.1 282 57.8
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 8.8e-82 307.8 285 55.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 5.7e-81 305.1 286 55.9
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.7e-80 303.5 279 55.6
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 3.7e-80 302.4 277 53.8
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 6.3e-80 301.6 277 54.5
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 7.0e-79 298.1 281 55.5
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.2e-78 297.4 288 54.2
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.3e-77 293.9 297 54.2
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 3.8e-77 292.4 253 62.1
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 9.4e-76 287.7 235 63.0
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 9.4e-76 287.7 293 51.9
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.2e-75 287.3 280 52.9
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 8.8e-74 281.2 265 56.6
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 8.8e-74 281.2 246 61.0
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.4e-71 273.1 280 52.9
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 4.1e-71 272.3 239 61.5
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 2.7e-70 269.6 279 54.1
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 5.9e-70 268.5 238 59.7
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.3e-69 267.3 235 59.6
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 3.7e-64 249.2 282 47.2
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.9e-64 248.8 273 49.1
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 6.3e-64 248.4 287 47.7
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.1e-63 247.7 280 50.7
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 1.1e-63 247.7 277 47.3
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 4.1e-63 245.7 254 53.5
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 1.1e-60 237.7 240 54.2
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 5.6e-60 235.3 301 45.5
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.3e-60 235.0 280 48.6
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 3.0e-58 229.6 239 51.9
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 3.5e-54 216.1 295 45.8
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.2e-49 201.1 208 51.9
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 2.6e-49 199.9 165 60.0
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 2.6e-49 199.9 165 60.0
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.3e-48 197.6 165 58.8
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.4e-47 194.1 165 58.2
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 1.4e-47 194.1 201 53.7
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 1.4e-47 194.1 249 45.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.9e-47 193.7 284 40.1
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 5.4e-47 192.2 198 51.5
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.6e-46 190.7 201 52.7
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 1.6e-46 190.7 265 46.0
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 6.0e-46 188.7 199 53.3
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 7.8e-46 188.3 291 38.1
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 5.0e-45 185.7 198 52.0
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 5.0e-45 185.7 113 79.6
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 8.1e-43 178.3 141 59.6
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.0e-42 176.0 205 46.8
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.2e-42 175.6 164 54.3
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 3.4e-41 172.9 140 60.0
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 3.7e-40 169.5 165 56.4
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 1.2e-38 164.5 227 44.1
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 7.3e-36 155.2 135 59.3
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.7e-35 152.5 214 44.4
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 5.2e-34 149.1 178 46.6
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 7.6e-33 145.2 92 75.0
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 1.1e-31 141.4 67 91.0
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 3.2e-31 139.8 208 44.2
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 7.1e-23 112.1 215 38.1
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.9e-15 87.4 95 51.6
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 7.1e-15 85.5 121 43.0
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 7.9e-14 82.0 91 47.3
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.0e-13 81.6 75 57.3
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 7.4e-12 75.5 128 40.6
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 4.2e-07 59.7 67 43.3
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.2e-06 58.2 100 32.0
Psat1g193640 Pisum sativum HOM05D000088 ORTHO05D003056 1.6e-06 57.8 106 32.1
Ca_00492_v3 Cicer arietinum L. HOM05D000088 ORTHO05D003056 2.1e-06 57.4 106 33.0
Potri.004G064400 Populus trichocarpa HOM05D000088 ORTHO05D003056 2.1e-06 57.4 101 29.7
Mapoly0031s0140 Marchantia polymorpha HOM05D000903 ORTHO05D000731 6.0e-06 55.8 117 33.3
MBI09_g28194_MAGBIO Magnolia biondii HOM05D000413 ORTHO05D000292 7.9e-06 55.5 94 33.0
Oeu026472.1 Olea europaea HOM05D000088 ORTHO05D003056 7.9e-06 55.5 129 29.5
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 7.9e-06 55.5 25 88.0


User provided reference genes

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