Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 4.8e-188 661.0 326 100.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 2.2e-156 555.8 308 86.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 9.1e-155 550.4 308 85.7
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 9.1e-155 550.4 308 85.7
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.0e-154 549.3 308 85.7
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.6e-151 539.7 313 84.3
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 6.1e-151 537.7 316 82.3
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 3.0e-150 535.4 309 82.8
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.5e-149 533.1 326 78.5
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.7e-148 529.6 326 78.2
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 3.7e-148 528.5 323 79.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 4.8e-148 528.1 326 77.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 6.3e-148 527.7 312 82.4
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.1e-147 526.9 313 81.5
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 2.4e-147 525.8 326 77.3
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.4e-147 525.8 326 77.3
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 3.1e-147 525.4 327 79.5
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 5.3e-147 524.6 323 78.9
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 6.9e-147 524.2 323 79.3
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.2e-146 523.5 323 79.3
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.5e-146 523.1 291 85.2
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.6e-146 522.3 326 76.7
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 5.9e-146 521.2 316 79.4
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 7.7e-146 520.8 312 82.7
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 7.7e-146 520.8 312 82.1
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.0e-145 520.4 309 80.9
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.0e-145 520.4 326 76.7
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.0e-145 520.4 326 76.7
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.2e-145 519.2 309 80.6
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 3.8e-145 518.5 317 78.5
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 5.0e-145 518.1 330 79.1
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.9e-144 516.2 333 76.6
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.2e-144 514.2 312 81.1
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 6.1e-143 511.1 320 78.4
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.0e-142 510.4 314 78.7
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.0e-142 510.4 313 81.2
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.0e-142 510.4 313 81.2
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 3.9e-142 508.4 319 77.4
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 3.9e-142 508.4 326 77.9
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 5.2e-142 508.1 314 79.0
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 6.7e-142 507.7 322 77.0
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.1e-141 506.9 335 77.6
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 2.6e-141 505.8 301 79.1
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 7.4e-141 504.2 317 77.0
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.3e-140 503.4 304 81.2
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.7e-140 503.1 329 76.3
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.7e-140 503.1 322 76.4
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.2e-140 502.7 330 76.4
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 2.8e-140 502.3 329 76.0
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 4.8e-140 501.5 329 76.0
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 5.3e-139 498.0 309 79.0
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 2.6e-138 495.7 310 79.7
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 3.5e-138 495.4 331 74.9
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 5.9e-138 494.6 330 75.2
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 3.8e-137 491.9 319 75.5
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.8e-137 491.9 331 74.3
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 8.5e-137 490.7 331 74.6
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.1e-136 490.3 327 75.8
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.1e-136 490.3 288 81.9
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-136 488.8 331 74.3
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 3.2e-136 488.8 331 74.3
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 3.2e-136 488.8 292 82.5
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.2e-135 486.9 332 73.5
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.2e-135 486.9 332 73.5
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.4e-134 483.4 275 82.9
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 7.5e-133 477.6 319 74.9
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.3e-129 466.8 393 63.4
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.1e-128 463.8 317 73.5
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 2.7e-127 459.1 427 59.5
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 3.6e-127 458.8 312 74.7
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.0e-126 457.2 314 74.8
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 4.4e-125 451.8 321 72.6
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 7.5e-125 451.1 259 83.8
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.0e-122 443.0 272 80.1
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 3.5e-122 442.2 275 79.3
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 2.3e-121 439.5 295 72.9
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 3.8e-121 438.7 263 80.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.9e-120 436.4 315 66.3
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 5.5e-120 434.9 284 77.1
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 5.5e-120 434.9 297 73.1
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-119 433.7 255 79.2
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.6e-119 433.3 346 65.9
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.0e-118 430.6 251 82.5
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 5.2e-118 428.3 330 68.5
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.7e-114 416.0 296 73.3
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.0e-113 414.1 307 69.1
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.0e-113 414.1 301 67.8
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.1e-112 410.6 260 76.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 8.0e-111 404.4 309 68.3
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.8e-110 403.3 310 64.2
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 5.2e-110 401.7 312 68.3
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 2.6e-109 399.4 246 79.7
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.7e-105 386.7 299 62.2
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 3.1e-102 375.9 289 61.6
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.0e-97 360.9 260 66.5
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 5.0e-97 358.6 289 66.4
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.6e-95 353.6 639 37.6
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.0e-93 346.7 320 61.6
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.8e-86 323.6 205 76.1
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.9e-83 313.5 316 54.4
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.8e-78 297.0 341 53.1
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 7.6e-77 291.6 240 65.4
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 7.8e-74 281.6 188 66.0
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 9.6e-72 274.6 205 63.4
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 2.8e-71 273.1 187 72.2
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.2e-67 259.2 155 80.6
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.8e-63 246.5 311 48.6
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 1.8e-62 243.8 159 73.6
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 5.3e-62 242.3 187 67.4
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 9.0e-62 241.5 154 74.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 7.6e-61 238.4 248 54.0
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-53 214.2 145 69.0
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 7.6e-53 211.8 174 58.6
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.2e-47 193.7 129 74.4
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 5.5e-43 179.1 101 81.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.9e-40 170.6 90 87.8
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.8e-33 147.5 278 35.3
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.5e-32 144.4 92 71.7
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.1e-30 136.7 80 80.0
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 5.3e-30 136.0 272 31.2
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.9e-19 100.9 358 26.5
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.1e-14 83.6 46 84.8
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.7e-10 70.5 54 63.0
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 6.8e-09 65.9 50 64.0
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-07 61.2 50 66.0
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 2.4e-06 57.4 65 49.2
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 9.1e-06 55.5 53 56.6


User provided reference genes

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