Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00630 Eucalyptus grandis HOM05D000021 ORTHO05D192996 4.3e-46 189.5 274 100.0
Eucgr.B02903 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.1e-14 85.1 100 53.0
Eucgr.E01607 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.1e-12 78.6 76 71.1
Eucgr.L01824 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.3e-12 76.3 77 70.1
Eucgr.C00631 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.0e-12 75.5 44 86.4
Eucgr.J01806 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.8e-11 72.8 141 51.1
MD11G1104600 Malus domestica HOM05D000021 ORTHO05D000010 2.1e-08 64.3 83 48.2
FvH4_7g06550 Fragaria vesca HOM05D000021 ORTHO05D000010 4.6e-08 63.2 82 47.6
FAN06G4071 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.6e-08 63.2 82 47.6
MD11G1105600 Malus domestica HOM05D000021 ORTHO05D000010 4.6e-08 63.2 83 43.4
RcHm_v2.0_Chr1g0356561 Rosa chinensis HOM05D000021 ORTHO05D000010 4.6e-08 63.2 75 49.3
FAN03G3326 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.0e-07 62.0 82 47.6
FAN10G0056 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.0e-07 62.0 82 47.6
RcHm_v2.0_Chr1g0355381 Rosa chinensis HOM05D000021 ORTHO05D000010 1.0e-07 62.0 58 60.3
RcHm_v2.0_Chr5g0043431 Rosa chinensis HOM05D000021 ORTHO05D000010 1.0e-07 62.0 79 45.6
RcHm_v2.0_Chr1g0356551 Rosa chinensis HOM05D000021 ORTHO05D000010 1.3e-07 61.6 58 58.6
MELO3C009177.2 Cucumis melo HOM05D000021 ORTHO05D000010 1.7e-07 61.2 74 50.0
FvH4_7g14700 Fragaria vesca HOM05D000021 ORTHO05D000010 3.0e-07 60.5 82 42.7
FAN06G2572 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.0e-07 60.5 82 42.7
FAN10G0263 Fragaria x ananassa HOM05D002506 ORTHO05D000010 3.0e-07 60.5 75 48.0
FAN10G3595 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.0e-07 60.5 78 48.7
FAN10G4007 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.0e-07 60.5 75 48.0
Glyma.09G217200 Glycine max HOM05D000021 ORTHO05D000010 3.0e-07 60.5 59 50.8
MD07G1220100 Malus domestica HOM05D000021 ORTHO05D000010 3.9e-07 60.1 75 48.0
Medtr5g044680 Medicago truncatula HOM05D000021 ORTHO05D000010 3.9e-07 60.1 77 45.5
VMungo1215G2225 Vigna mungo HOM05D000021 ORTHO05D000010 3.9e-07 60.1 80 45.0
CsaV3_3G033910 Cucumis sativus L. HOM05D000021 ORTHO05D000010 5.1e-07 59.7 58 56.9
Ciclev10033823m.g Citrus clementina HOM05D000021 ORTHO05D000010 6.6e-07 59.3 77 42.9
FAN03G0641 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.6e-07 59.3 82 42.7
FAN10G0116 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.6e-07 59.3 82 42.7
RcHm_v2.0_Chr4g0408081 Rosa chinensis HOM05D000021 ORTHO05D000010 6.6e-07 59.3 83 45.8
FAN10G1127 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.7e-07 58.9 75 48.0
Psat3g130080 Pisum sativum HOM05D000021 ORTHO05D000010 8.7e-07 58.9 55 54.5
RcHm_v2.0_Chr1g0356511 Rosa chinensis HOM05D000021 ORTHO05D000010 8.7e-07 58.9 82 45.1
Ca_25055_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 1.1e-06 58.5 82 39.0
FvH4_7g14500 Fragaria vesca HOM05D000021 ORTHO05D000010 1.1e-06 58.5 78 47.4
FAN06G0789 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.1e-06 58.5 78 47.4
FAN03G0815 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.5e-06 58.2 75 48.0
Glyma.03G096600 Glycine max HOM05D000021 ORTHO05D000010 1.5e-06 58.2 50 56.0
MD11G1103100 Malus domestica HOM05D000021 ORTHO05D000010 1.5e-06 58.2 77 44.2
RcHm_v2.0_Chr4g0409651 Rosa chinensis HOM05D000021 ORTHO05D000010 1.5e-06 58.2 58 58.6
Rhsim09G0174600 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.9e-06 57.8 83 43.4
CiPaw.05G135900 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.5e-06 57.4 83 42.2
MD00G1043900 Malus domestica HOM05D000021 ORTHO05D000010 2.5e-06 57.4 83 39.8
MD00G1178900 Malus domestica HOM05D000021 ORTHO05D000010 2.5e-06 57.4 79 44.3
Prupe.6G248500 Prunus persica HOM05D000021 ORTHO05D000010 2.5e-06 57.4 76 47.4
RcHm_v2.0_Chr7g0215121 Rosa chinensis HOM05D000021 ORTHO05D000010 2.5e-06 57.4 58 55.2
FAN10G1011 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.3e-06 57.0 50 62.0
RcHm_v2.0_Chr1g0374361 Rosa chinensis HOM05D000021 ORTHO05D000010 3.3e-06 57.0 83 42.2
FAN01G1213 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.3e-06 56.6 82 37.8
MD11G1106400 Malus domestica HOM05D000021 ORTHO05D000010 4.3e-06 56.6 76 43.4
PGR042G3291 Punica granatum HOM05D000021 ORTHO05D000010 4.3e-06 56.6 76 47.4
Ciclev10033951m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.6e-06 56.2 77 41.6
RcHm_v2.0_Chr5g0043551 Rosa chinensis HOM05D000021 ORTHO05D000010 5.6e-06 56.2 52 53.8
Sed0016753 Sechium edule HOM05D000021 ORTHO05D000010 5.6e-06 56.2 58 56.9
Haze_17211 Corylus avellana HOM05D000021 ORTHO05D000010 7.3e-06 55.8 59 55.9
MD07G1219100 Malus domestica HOM05D000021 ORTHO05D000010 7.3e-06 55.8 77 42.9
MD07G1255300 Malus domestica HOM05D000021 ORTHO05D000010 7.3e-06 55.8 77 41.6
Medtr5g026000 Medicago truncatula HOM05D000021 ORTHO05D000010 7.3e-06 55.8 82 39.0
MD00G1048100 Malus domestica HOM05D000021 ORTHO05D000010 9.6e-06 55.5 58 50.0
MD03G1072600 Malus domestica HOM05D000021 ORTHO05D000010 9.6e-06 55.5 49 57.1
MD11G1103600 Malus domestica HOM05D000021 ORTHO05D000010 9.6e-06 55.5 83 41.0
QL06p003691 Quercus lobata HOM05D000021 ORTHO05D000010 9.6e-06 55.5 78 44.9


User provided reference genes

Program Settings