Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 2.5e-81 305.4 160 100.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.1e-44 183.7 129 71.3
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 8.7e-42 174.1 152 61.8
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 2.5e-41 172.6 155 61.3
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 7.3e-41 171.0 154 59.1
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.2e-40 170.2 159 56.6
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.8e-40 169.1 162 58.0
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 3.6e-40 168.7 152 59.2
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 6.2e-40 167.9 151 60.9
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 8.1e-40 167.5 154 61.7
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.4e-39 166.8 151 59.6
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.8e-39 166.4 107 76.6
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.8e-39 166.4 152 59.2
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.8e-39 166.4 154 61.7
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.4e-39 166.0 151 59.6
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 4.0e-39 165.2 151 60.3
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 4.0e-39 165.2 149 63.1
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 6.9e-39 164.5 151 62.3
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 6.9e-39 164.5 151 62.3
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 1.2e-38 163.7 97 77.3
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 2.0e-38 162.9 151 63.6
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.0e-38 162.9 151 60.3
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.0e-38 162.9 151 60.3
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 2.0e-38 162.9 113 71.7
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 3.4e-38 162.2 154 56.5
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 4.4e-38 161.8 153 59.5
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 4.4e-38 161.8 131 61.1
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.4e-38 161.8 153 60.8
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 5.8e-38 161.4 153 60.1
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 7.6e-38 161.0 151 59.6
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 9.9e-38 160.6 151 53.0
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.3e-37 160.2 98 77.6
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.3e-37 160.2 113 71.7
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.7e-37 159.8 155 57.4
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.9e-37 159.1 138 59.4
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 4.9e-37 158.3 107 69.2
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.9e-37 158.3 151 57.6
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 8.4e-37 157.5 153 56.9
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.1e-36 157.1 104 68.3
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 1.4e-36 156.8 106 71.7
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.4e-36 156.8 101 74.3
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 1.9e-36 156.4 154 56.5
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 1.9e-36 156.4 113 69.9
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 2.4e-36 156.0 151 57.0
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 3.2e-36 155.6 97 71.1
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 4.2e-36 155.2 96 72.9
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 5.4e-36 154.8 108 72.2
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 9.3e-36 154.1 97 72.2
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 9.3e-36 154.1 151 55.6
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.2e-35 153.7 151 58.9
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.1e-35 152.9 134 59.0
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 3.5e-35 152.1 101 70.3
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.6e-35 151.8 97 71.1
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.6e-35 151.8 97 74.2
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 6.0e-35 151.4 149 55.0
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 6.0e-35 151.4 153 53.6
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 6.0e-35 151.4 153 53.6
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.0e-34 150.6 161 52.8
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 3.0e-34 149.1 155 51.6
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 3.9e-34 148.7 152 53.9
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 6.6e-34 147.9 154 53.9
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 8.7e-34 147.5 155 51.6
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 8.7e-34 147.5 151 54.3
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 8.7e-34 147.5 97 72.2
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.1e-33 147.1 103 68.9
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.5e-33 146.7 106 66.0
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 3.3e-33 145.6 151 53.6
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 3.3e-33 145.6 97 69.1
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 4.3e-33 145.2 157 52.2
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 7.3e-33 144.4 158 50.6
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 7.3e-33 144.4 153 52.9
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.3e-32 143.7 154 55.8
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.6e-32 143.3 106 65.1
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 2.8e-32 142.5 151 55.0
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 2.8e-32 142.5 124 59.7
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.8e-32 142.5 159 54.1
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 4.8e-32 141.7 156 50.0
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 4.8e-32 141.7 129 55.8
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.1e-31 140.6 130 56.9
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.1e-31 140.6 106 63.2
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.8e-31 139.8 106 63.2
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 3.1e-31 139.0 117 59.8
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 3.1e-31 139.0 148 52.0
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 5.3e-31 138.3 151 51.0
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 5.3e-31 138.3 152 52.0
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 5.3e-31 138.3 96 69.8
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.5e-30 136.7 104 63.5
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 2.0e-30 136.3 150 53.3
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 2.6e-30 136.0 105 62.9
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 4.5e-30 135.2 96 69.8
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 4.5e-30 135.2 151 53.6
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 5.8e-30 134.8 104 62.5
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 7.6e-30 134.4 97 67.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.3e-29 133.7 152 51.3
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.7e-29 133.3 194 45.4
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 1.7e-29 133.3 119 55.5
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 2.2e-29 132.9 94 67.0
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 2.9e-29 132.5 151 50.3
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.8e-29 132.1 122 59.8
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 1.4e-28 130.2 92 64.1
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 3.5e-27 125.6 177 45.2
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 4.6e-27 125.2 179 41.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.8e-26 123.2 128 56.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 6.7e-26 121.3 101 58.4
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.1e-24 116.3 155 49.0
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 2.8e-24 115.9 74 77.0
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 6.9e-23 111.3 185 37.8
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 9.9e-22 107.5 164 43.9
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 3.2e-20 102.4 97 56.7
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 7.1e-20 101.3 110 56.4
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 1.2e-19 100.5 60 75.0
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 5.1e-18 95.1 54 81.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 6.7e-18 94.7 54 81.5
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 1.1e-17 94.0 114 43.0
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.5e-17 92.8 107 42.1
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.0e-14 83.2 103 50.5
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 2.0e-14 83.2 96 44.8
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.2e-13 79.7 118 37.3
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 4.2e-12 75.5 124 36.3
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 5.1e-10 68.6 42 71.4


User provided reference genes

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