Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 0.0e+00 1090.5 539 100.0
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 8.1e-201 704.1 553 66.9
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 6.0e-188 661.4 551 65.2
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 3.7e-185 652.1 554 63.7
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 1.8e-184 649.8 543 63.9
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 3.1e-184 649.0 546 63.7
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 4.0e-184 648.7 551 63.2
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 1.7e-182 643.3 558 64.0
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 6.4e-182 641.3 551 62.8
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 7.1e-181 637.9 544 63.1
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 1.2e-180 637.1 541 63.8
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 1.3e-179 633.6 544 63.1
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 1.8e-179 633.3 552 61.4
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 3.0e-179 632.5 547 62.2
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 3.3e-178 629.0 571 60.2
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 4.3e-178 628.6 548 63.0
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 5.3e-176 621.7 558 62.0
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 1.5e-175 620.2 554 61.2
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 5.8e-175 618.2 556 61.7
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 1.3e-174 617.1 537 61.1
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 4.2e-173 612.1 544 61.8
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 4.6e-172 608.6 538 59.9
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 1.8e-171 606.7 553 58.6
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 4.3e-170 602.1 531 60.5
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 3.7e-169 599.0 554 59.9
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 1.4e-168 597.0 544 59.9
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 1.8e-168 596.7 545 59.6
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 2.4e-168 596.3 546 59.7
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 3.1e-168 595.9 548 57.5
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 4.1e-168 595.5 553 58.8
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 4.1e-168 595.5 542 60.0
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 4.1e-168 595.5 547 60.0
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 3.4e-167 592.4 555 58.9
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 2.2e-166 589.7 553 59.1
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 3.8e-166 589.0 553 59.0
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 6.5e-166 588.2 545 58.0
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 6.5e-166 588.2 543 59.1
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 8.5e-166 587.8 552 58.7
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 8.5e-166 587.8 551 57.7
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.4e-165 587.0 546 58.8
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 4.2e-165 585.5 545 57.6
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 7.2e-165 584.7 550 59.6
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 9.4e-165 584.3 545 57.4
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 2.1e-164 583.2 551 58.3
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 2.7e-164 582.8 553 57.1
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 3.6e-164 582.4 541 57.9
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 7.9e-164 581.3 555 57.8
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 1.0e-163 580.9 556 58.3
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 1.8e-163 580.1 555 58.6
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 7.4e-162 574.7 546 57.5
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 9.7e-162 574.3 514 58.8
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 2.2e-161 573.2 552 56.5
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 2.8e-161 572.8 552 55.8
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 3.7e-161 572.4 542 57.6
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 3.7e-161 572.4 542 57.4
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 6.3e-161 571.6 542 57.6
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 1.1e-160 570.9 544 56.4
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 1.8e-160 570.1 540 58.0
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 5.3e-160 568.5 549 55.9
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 6.9e-160 568.2 549 57.0
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 1.5e-159 567.0 554 57.4
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 2.6e-159 566.2 559 56.7
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 3.4e-159 565.8 558 56.1
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 4.5e-159 565.5 559 55.6
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 4.5e-159 565.5 547 57.2
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 7.7e-159 564.7 541 57.5
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.3e-158 563.9 565 56.6
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 2.9e-158 562.8 535 55.3
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.9e-158 562.8 550 56.7
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 5.0e-158 562.0 558 55.4
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 6.5e-158 561.6 546 56.8
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 1.4e-157 560.5 546 57.0
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 7.2e-157 558.1 554 56.3
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 9.4e-157 557.8 563 55.6
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 9.4e-157 557.8 554 56.9
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 1.6e-156 557.0 556 56.7
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.1e-156 555.1 595 52.4
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 1.5e-154 550.4 547 55.6
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 3.3e-154 549.3 555 56.9
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 5.7e-154 548.5 531 55.7
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 3.7e-153 545.8 539 56.2
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 2.0e-151 540.0 538 55.9
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 5.9e-151 538.5 553 54.1
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.3e-150 537.3 565 53.6
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 8.5e-150 534.6 491 58.5
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 1.4e-149 533.9 487 61.4
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 7.2e-149 531.6 535 56.8
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 2.1e-148 530.0 541 55.8
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 1.4e-147 527.3 547 54.5
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 3.3e-146 522.7 460 59.6
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 9.7e-146 521.2 620 50.8
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.3e-145 520.8 541 53.4
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 3.7e-145 519.2 570 51.8
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 1.4e-144 517.3 516 56.4
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 5.3e-144 515.4 523 56.0
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 2.0e-143 513.5 480 57.9
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 1.3e-142 510.8 606 47.9
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 6.5e-142 508.4 492 57.7
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 2.5e-141 506.5 556 53.4
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 7.2e-141 505.0 497 55.1
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 7.2e-141 505.0 549 52.3
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 2.6e-138 496.5 471 55.6
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 7.5e-138 495.0 545 52.8
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 1.7e-137 493.8 581 49.2
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 2.4e-136 490.0 468 55.6
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 4.1e-136 489.2 560 52.5
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 9.1e-136 488.0 468 56.2
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 2.0e-135 486.9 503 55.9
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 1.2e-132 477.6 538 49.6
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 1.6e-132 477.2 544 49.3
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 9.8e-130 468.0 566 47.9
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 1.7e-129 467.2 516 51.6
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 5.4e-128 462.2 466 58.4
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 2.1e-124 450.3 478 51.7
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.8e-120 437.2 548 47.8
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 8.0e-116 421.8 537 45.3
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.9e-112 410.6 462 53.5
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 1.0e-110 404.8 443 50.3
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 1.5e-109 401.0 501 49.5
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 6.2e-108 395.6 576 40.3
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 6.2e-108 395.6 576 40.3
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 5.2e-107 392.5 529 41.6
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 6.8e-107 392.1 573 40.5
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 4.6e-103 379.4 323 61.3
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 2.8e-100 370.2 318 62.6
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 6.2e-100 369.0 532 40.4
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.1e-99 368.2 587 37.8
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 2.3e-99 367.1 515 42.9
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 9.9e-90 335.1 417 47.5
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 2.2e-89 334.0 549 40.3
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 1.7e-81 307.8 360 48.1
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 2.1e-76 290.8 701 31.0
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 3.0e-70 270.4 165 71.5
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.3e-69 266.5 588 31.6
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 1.0e-65 255.4 395 45.6
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.2e-65 254.2 645 30.1
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 6.5e-65 252.7 164 70.7
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 5.1e-62 243.0 456 38.2
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 1.3e-49 201.8 195 60.0
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 9.4e-48 195.7 231 45.9
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 2.1e-47 194.5 164 66.5
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 2.0e-45 188.0 257 49.0
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.8e-36 157.5 173 54.9
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 4.8e-36 156.8 280 38.9
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 4.1e-35 153.7 139 62.6
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 1.5e-34 151.8 161 54.0
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 5.9e-34 149.8 96 68.8
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 1.7e-33 148.3 158 59.5
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.7e-28 130.6 94 66.0
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.4e-27 128.6 137 51.8
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 2.2e-25 121.3 170 37.6
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 1.2e-21 109.0 180 33.9
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 1.2e-18 99.0 102 46.1
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 8.5e-17 92.8 68 63.2
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 4.7e-15 87.0 100 54.0
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 4.5e-10 70.5 39 79.5


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