Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.1e-156 556.6 293 100.0
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 5.2e-85 318.5 229 73.4
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 2.5e-79 299.7 228 66.7
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 6.8e-77 291.6 233 64.4
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 8.9e-77 291.2 249 64.3
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 8.9e-77 291.2 227 66.1
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 8.9e-77 291.2 227 66.1
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.5e-76 290.4 231 67.5
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 2.0e-76 290.0 230 66.1
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 2.0e-76 290.0 230 67.8
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 9.8e-76 287.7 230 63.5
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 9.8e-76 287.7 229 67.2
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 1.7e-75 287.0 226 65.9
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.7e-75 287.0 232 67.7
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 6.4e-75 285.0 230 63.9
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 1.1e-74 284.3 222 67.1
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 5.4e-74 282.0 231 66.2
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 2.1e-73 280.0 227 65.6
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 2.1e-73 280.0 230 63.9
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 2.7e-73 279.6 234 63.2
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 3.9e-72 275.8 232 62.1
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 5.1e-72 275.4 229 65.9
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 6.6e-72 275.0 228 63.2
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.1e-71 274.2 229 65.9
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 7.3e-71 271.6 230 63.5
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 7.3e-71 271.6 242 62.0
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 2.1e-70 270.0 234 60.3
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 2.8e-70 269.6 232 62.9
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 3.6e-70 269.2 231 59.3
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 6.2e-70 268.5 242 60.3
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 8.1e-70 268.1 233 62.2
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.8e-69 266.9 229 59.4
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 1.8e-69 266.9 231 58.4
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 3.1e-69 266.2 251 56.2
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 4.0e-69 265.8 230 63.5
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 5.2e-69 265.4 229 59.4
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 6.8e-69 265.0 257 57.6
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 8.9e-69 264.6 230 60.4
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.2e-68 264.2 230 62.2
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 2.0e-68 263.5 233 63.5
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.0e-68 263.5 232 61.2
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 4.4e-68 262.3 234 63.2
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 4.4e-68 262.3 230 60.4
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 9.9e-68 261.2 241 58.5
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 9.9e-68 261.2 234 61.1
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.3e-67 260.8 234 57.7
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 1.3e-67 260.8 233 62.2
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.3e-67 260.8 232 60.8
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.7e-67 260.4 204 69.1
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 4.9e-67 258.8 230 58.3
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 6.4e-67 258.5 231 58.9
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 8.3e-67 258.1 235 59.1
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 1.1e-66 257.7 230 60.9
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.4e-66 257.3 234 60.7
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 2.4e-66 256.5 230 60.4
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 4.1e-66 255.8 231 58.0
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 4.1e-66 255.8 229 58.1
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 5.4e-66 255.4 230 60.4
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 9.2e-66 254.6 230 59.6
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 1.2e-65 254.2 230 60.4
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 1.2e-65 254.2 230 59.6
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 1.2e-65 254.2 231 59.3
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.2e-65 254.2 231 61.5
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 1.6e-65 253.8 233 60.1
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.7e-65 253.1 230 59.1
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 3.5e-65 252.7 230 60.4
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 3.5e-65 252.7 270 54.8
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 4.6e-65 252.3 228 60.1
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 4.6e-65 252.3 222 61.7
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 4.6e-65 252.3 242 56.6
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 6.0e-65 251.9 231 61.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 1.0e-64 251.1 231 57.6
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 1.0e-64 251.1 231 57.6
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.3e-64 250.8 230 59.1
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.3e-64 250.0 230 57.8
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 3.0e-64 249.6 231 56.7
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 3.0e-64 249.6 231 56.7
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 3.0e-64 249.6 231 56.7
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 8.6e-64 248.1 241 56.8
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 2.5e-63 246.5 230 59.1
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 2.5e-63 246.5 230 59.1
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.3e-63 246.1 232 58.2
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 4.3e-63 245.7 199 65.8
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 5.6e-63 245.4 230 58.7
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.1e-62 243.4 250 55.6
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.7e-62 242.3 232 58.2
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 1.5e-60 237.3 230 58.3
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 2.1e-57 226.9 223 57.8
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 4.6e-57 225.7 241 53.5
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 6.6e-56 221.9 229 57.2
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 8.7e-56 221.5 229 54.1
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 4.3e-55 219.2 228 53.9
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 5.6e-55 218.8 228 52.2
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 1.6e-54 217.2 241 54.4
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 8.4e-51 204.9 233 51.1
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 4.2e-50 202.6 170 61.2
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 5.4e-50 202.2 169 59.2
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.1e-47 194.5 309 41.7
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 1.3e-46 191.0 167 61.1
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 1.3e-43 181.0 226 47.8
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.1e-34 151.4 129 58.1
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 2.3e-32 143.7 108 66.7
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 2.8e-30 136.7 158 50.6
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.3e-27 127.9 116 58.6
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.3e-27 127.9 116 58.6
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 2.7e-25 120.2 225 38.7
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 3.9e-24 116.3 88 67.0
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.2e-20 104.8 117 49.6
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 6.5e-19 99.0 164 37.2
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 1.6e-17 94.4 116 49.1
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 1.0e-16 91.7 184 34.8
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.5e-15 87.8 82 58.5
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 3.1e-13 80.1 94 46.8
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 1.5e-12 77.8 62 66.1
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 2.2e-11 73.9 189 30.2
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 1.1e-07 61.6 151 29.8


User provided reference genes

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