Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.4e-176 622.1 325 100.0
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 3.7e-124 448.7 327 73.4
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.0e-118 430.6 330 70.6
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 1.8e-118 429.9 334 71.0
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 2.3e-118 429.5 329 71.1
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.3e-118 429.5 326 70.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 3.0e-118 429.1 324 72.8
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 3.0e-118 429.1 323 74.0
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 5.7e-117 424.9 326 70.6
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.3e-116 423.7 322 72.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.7e-116 423.3 327 70.3
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.7e-116 423.3 327 70.3
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 3.7e-116 422.2 228 97.4
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.1e-115 420.6 323 70.3
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.1e-115 420.6 326 69.9
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 2.4e-115 419.5 321 72.9
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 3.1e-115 419.1 326 69.6
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.1e-115 419.1 331 70.4
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.2e-114 417.2 325 69.8
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.2e-114 417.2 293 76.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.2e-114 417.2 322 69.6
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 2.0e-114 416.4 327 71.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.7e-114 416.0 327 69.4
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 4.5e-114 415.2 326 69.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 5.9e-114 414.8 329 71.1
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 5.9e-114 414.8 332 70.2
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 5.9e-114 414.8 324 67.9
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.0e-113 414.1 259 82.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.3e-113 413.7 328 69.2
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.9e-113 412.5 259 83.0
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.9e-113 412.5 324 69.1
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 3.8e-113 412.1 325 68.0
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 8.5e-113 411.0 300 71.7
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.5e-112 410.2 329 67.2
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 5.5e-112 408.3 259 80.7
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 5.5e-112 408.3 324 67.9
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 7.2e-112 407.9 327 70.0
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 7.2e-112 407.9 326 69.6
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.2e-111 407.1 271 78.2
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.6e-111 406.8 327 66.4
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.7e-111 406.0 327 70.3
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.6e-111 405.6 296 71.3
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 6.1e-111 404.8 270 79.3
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 8.0e-111 404.4 326 68.4
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.0e-110 404.1 299 72.2
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.8e-110 403.3 327 69.7
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.8e-110 403.3 273 76.2
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.2e-110 401.7 332 66.9
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 5.2e-110 401.7 348 64.7
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.5e-109 400.2 284 73.2
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 5.7e-109 398.3 331 66.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 7.5e-109 397.9 330 67.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 7.5e-109 397.9 274 76.6
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 7.5e-109 397.9 284 73.9
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 7.5e-109 397.9 332 66.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.3e-108 397.1 259 79.9
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.2e-108 396.4 326 66.0
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.8e-108 396.0 259 78.4
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.8e-108 396.0 259 78.4
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 4.9e-108 395.2 334 65.9
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 6.3e-108 394.8 259 78.0
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 8.3e-108 394.4 332 66.0
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.4e-107 393.7 326 66.6
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.8e-107 393.3 284 72.5
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.8e-107 393.3 249 82.7
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.4e-107 392.9 325 66.8
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.4e-107 392.9 288 72.2
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 3.1e-107 392.5 259 79.2
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.1e-107 392.1 324 66.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 7.0e-107 391.3 250 84.0
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.6e-106 390.2 259 77.6
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 3.5e-106 389.0 260 78.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.7e-105 386.7 303 70.6
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.3e-105 386.3 332 65.4
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.1e-104 384.0 327 64.8
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.5e-104 383.6 325 68.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.5e-104 382.9 310 67.1
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.5e-104 382.9 353 62.3
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 3.3e-104 382.5 324 65.1
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 3.3e-104 382.5 238 84.0
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.0e-102 377.5 252 79.0
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.6e-101 372.9 256 75.4
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 9.8e-101 370.9 327 64.5
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.8e-99 366.7 236 79.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 4.6e-98 362.1 259 70.7
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.0e-97 360.9 327 61.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.7e-97 360.1 332 60.2
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.0e-97 359.4 344 60.2
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 2.0e-93 346.7 292 66.4
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.7e-92 342.4 221 79.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.9e-91 340.1 250 72.8
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 8.6e-89 331.3 231 74.5
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.5e-85 320.5 235 69.4
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.4e-85 319.3 324 57.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 4.6e-82 308.9 255 65.5
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.9e-81 305.8 221 74.7
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 6.6e-81 305.1 257 66.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.0e-78 295.8 188 79.3
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.4e-75 287.3 216 64.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.5e-72 276.6 261 53.6
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 6.2e-71 271.9 269 59.1
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 8.9e-70 268.1 295 49.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.2e-67 259.6 328 45.1
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.6e-61 238.4 269 46.1
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 7.1e-59 231.9 292 45.2
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.0e-58 228.8 251 49.4
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.3e-57 227.6 253 47.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.8e-55 219.2 249 49.8
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.4e-51 207.6 129 83.7
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 3.3e-48 196.4 258 41.5
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.1e-39 167.2 123 71.5
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.4e-38 164.5 249 41.0
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.8e-38 164.1 167 59.9
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 5.5e-35 152.5 246 35.8
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.2e-28 130.6 322 36.0
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 2.7e-18 97.1 261 30.7
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 1.0e-09 68.6 52 65.4
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.8e-06 57.8 32 90.6
SEGI_14321 Sequoiadendron giganteum HOM05D006532 ORTHO05D385294 5.3e-06 56.2 69 50.7


User provided reference genes

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