Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00578 Eucalyptus grandis HOM05D000433 ORTHO05D013160 5.2e-90 334.3 165 100.0
Eucgr.C00545 Eucalyptus grandis HOM05D000433 ORTHO05D003991 9.6e-28 127.5 86 69.8
TAR383G1023 Trochodendron aralioides HOM05D000433 ORTHO05D003991 9.9e-25 117.5 239 35.1
Eucgr.C00308 Eucalyptus grandis HOM05D000433 ORTHO05D013160 7.9e-22 107.8 78 67.9
GSVIVG01035633001 Vitis vinifera HOM05D000433 ORTHO05D003991 1.3e-21 107.1 79 59.5
TAR383G0708 Trochodendron aralioides HOM05D000433 ORTHO05D003991 1.8e-21 106.7 258 30.6
MD15G1094300 Malus domestica HOM05D000433 ORTHO05D003991 3.0e-21 105.9 92 54.3
Prupe.1G449300 Prunus persica HOM05D000433 ORTHO05D003991 1.5e-20 103.6 83 60.2
Atru.chr7.2098 Acer truncatum HOM05D000433 ORTHO05D003991 5.6e-20 101.7 135 43.0
Atru.chr7.2110 Acer truncatum HOM05D000433 ORTHO05D003991 7.4e-20 101.3 135 42.2
Dinv14256 Davidia involucrata HOM05D000433 ORTHO05D003991 1.6e-19 100.1 107 46.7
Dinv27895 Davidia involucrata HOM05D000433 ORTHO05D003991 1.6e-19 100.1 109 46.8
FvH4_2g35680 Fragaria vesca HOM05D000433 ORTHO05D003991 2.1e-19 99.8 77 58.4
Phvul.009G109100 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 2.8e-19 99.4 84 53.6
GSVIVG01035636001 Vitis vinifera HOM05D000433 ORTHO05D003991 3.6e-19 99.0 120 45.0
PSO210G3307 Papaver somniferum HOM05D000433 ORTHO05D003991 4.8e-19 98.6 81 56.8
FAN08G0103 Fragaria x ananassa HOM05D000433 ORTHO05D003991 6.2e-19 98.2 83 55.4
Manes.03G057750 Manihot esculenta HOM05D000433 ORTHO05D003991 8.1e-19 97.8 87 50.6
VMungo1309G1574 Vigna mungo HOM05D000433 ORTHO05D003991 8.1e-19 97.8 84 52.4
Prupe.1G449200 Prunus persica HOM05D000433 ORTHO05D003991 1.4e-18 97.1 83 56.6
Actinidia30272 Actinidia chinensis HOM05D000433 ORTHO05D003991 1.8e-18 96.7 85 51.8
GSVIVG01035632001 Vitis vinifera HOM05D000433 ORTHO05D003991 2.4e-18 96.3 82 57.3
Oeu036367.1 Olea europaea HOM05D000433 ORTHO05D003991 3.1e-18 95.9 121 39.7
Zm00001eb375850 Zea mays HOM05D000433 ORTHO05D003991 3.1e-18 95.9 167 33.5
TWI34G1265 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 4.0e-18 95.5 90 48.9
DCAR_003120 Daucus carota HOM05D000433 ORTHO05D003991 5.3e-18 95.1 81 54.3
Dinv14259 Davidia involucrata HOM05D000433 ORTHO05D003991 5.3e-18 95.1 150 32.7
Hma1.2p1_0049F.1_g028710 Hydrangea macrophylla HOM05D000433 ORTHO05D003991 5.3e-18 95.1 124 37.9
FvH4_2g35682 Fragaria vesca HOM05D000433 ORTHO05D003991 6.9e-18 94.7 79 55.7
TPR.G1382 Trifolium pratense HOM05D000433 ORTHO05D003991 1.5e-17 93.6 94 44.7
TWI34G0984 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 1.5e-17 93.6 90 47.8
ATR0705G137 Amborella trichopoda HOM05D000433 ORTHO05D003991 2.0e-17 93.2 91 46.2
Ciclev10010551m.g Citrus clementina HOM05D000433 ORTHO05D003991 2.0e-17 93.2 83 53.0
Lj1g0021560 Lotus japonicus HOM05D000433 ORTHO05D003991 2.0e-17 93.2 84 52.4
Peaxi162Scf00323g00934 Petunia axillaris HOM05D000433 ORTHO05D003991 2.0e-17 93.2 112 45.5
CAN.G792.2 Capsicum annuum HOM05D000433 ORTHO05D003991 2.6e-17 92.8 97 47.4
Thecc.09G043900 Theobroma cacao HOM05D000433 ORTHO05D003991 2.6e-17 92.8 81 50.6
ClCG00G005190 Citrullus lanatus HOM05D000433 ORTHO05D003991 3.4e-17 92.4 92 47.8
Lj1g0020723 Lotus japonicus HOM05D000433 ORTHO05D003991 3.4e-17 92.4 84 50.0
Lj1g0023259 Lotus japonicus HOM05D000433 ORTHO05D003991 3.4e-17 92.4 84 50.0
PGR044G1800 Punica granatum HOM05D000433 ORTHO05D003991 3.4e-17 92.4 81 49.4
Glyma.04G083500 Glycine max HOM05D000433 ORTHO05D003991 4.5e-17 92.0 78 51.3
VMungo1309G2807 Vigna mungo HOM05D000433 ORTHO05D003991 4.5e-17 92.0 147 32.7
Atru.chr7.2096 Acer truncatum HOM05D000433 ORTHO05D003991 5.8e-17 91.7 103 43.7
CANSAT25G0153 Cannabis sativa HOM05D000433 ORTHO05D003991 5.8e-17 91.7 83 53.0
COL.COLO4_18652 Corchorus olitorius HOM05D000433 ORTHO05D013160 5.8e-17 91.7 103 44.7
FAN20G2984 Fragaria x ananassa HOM05D000433 ORTHO05D003991 5.8e-17 91.7 79 54.4
Cpa.g.sc522.4 Carica papaya HOM05D000433 ORTHO05D003991 7.6e-17 91.3 102 42.2
Dinv38695 Davidia involucrata HOM05D000433 ORTHO05D003991 7.6e-17 91.3 80 53.8
Eucgr.C02920 Eucalyptus grandis HOM05D000433 ORTHO05D003991 7.6e-17 91.3 89 49.4
Glyma.06G085100 Glycine max HOM05D000433 ORTHO05D003991 7.6e-17 91.3 95 44.2
Manes.03G058000 Manihot esculenta HOM05D000433 ORTHO05D003991 7.6e-17 91.3 126 38.1
Solyc11g071227.1 Solanum lycopersicum HOM05D000433 ORTHO05D003991 7.6e-17 91.3 92 50.0
DCAR_003121 Daucus carota HOM05D000433 ORTHO05D003991 9.9e-17 90.9 140 35.0
FAN15G3649 Fragaria x ananassa HOM05D000433 ORTHO05D003991 9.9e-17 90.9 81 53.1
Actinidia30273 Actinidia chinensis HOM05D000433 ORTHO05D003991 1.3e-16 90.5 83 49.4
CAN.G309.89 Capsicum annuum HOM05D000433 ORTHO05D003991 1.3e-16 90.5 91 49.5
Peaxi162Scf00227g00007 Petunia axillaris HOM05D000433 ORTHO05D003991 1.3e-16 90.5 112 45.5
Potri.006G239402 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.3e-16 90.5 90 46.7
Sed0013565 Sechium edule HOM05D000433 ORTHO05D003991 1.3e-16 90.5 78 55.1
Sopen11g028910 Solanum pennellii HOM05D000433 ORTHO05D003991 1.3e-16 90.5 91 49.5
Eucgr.C02923 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.7e-16 90.1 86 47.7
Gohir.A05G047200 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.7e-16 90.1 143 32.9
MD08G1115100 Malus domestica HOM05D000433 ORTHO05D003991 1.7e-16 90.1 84 51.2
Zm00001eb309770 Zea mays HOM05D000433 ORTHO05D003991 1.7e-16 90.1 97 46.4
MD08G1115000 Malus domestica HOM05D000433 ORTHO05D003991 2.2e-16 89.7 96 44.8
Potri.018G042650 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.2e-16 89.7 93 47.3
TWI34G1621 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 2.2e-16 89.7 87 47.1
MD15G1094100 Malus domestica HOM05D000433 ORTHO05D003991 2.9e-16 89.4 85 49.4
Thecc.09G044000 Theobroma cacao HOM05D000433 ORTHO05D013160 3.8e-16 89.0 83 48.2
COL.COLO4_18651 Corchorus olitorius HOM05D000433 ORTHO05D003991 4.9e-16 88.6 104 44.2
Duzib168G1402 Durio zibethinus HOM05D000433 ORTHO05D003991 4.9e-16 88.6 103 43.7
Gohir.D06G093300 Gossypium hirsutum HOM05D000433 ORTHO05D003991 4.9e-16 88.6 80 52.5
Gorai.010G107700 Gossypium raimondii HOM05D000433 ORTHO05D003991 4.9e-16 88.6 80 52.5
Peaxi162Scf00323g00925 Petunia axillaris HOM05D000433 ORTHO05D003991 4.9e-16 88.6 112 43.8
ClCG11G015170 Citrullus lanatus HOM05D000433 ORTHO05D003991 6.4e-16 88.2 98 43.9
Migut.A00213 Erythranthe guttata HOM05D000433 ORTHO05D003991 6.4e-16 88.2 135 34.1
Lj7C703T4 Lonicera japonica HOM05D000433 ORTHO05D003991 6.4e-16 88.2 81 50.6
arahy.Tifrunner.gnm1.ann1.I9LXD5 Arachis hypogaea HOM05D000433 ORTHO05D003991 8.4e-16 87.8 147 35.4
Gohir.A06G093600 Gossypium hirsutum HOM05D000433 ORTHO05D003991 8.4e-16 87.8 80 51.2
Gorai.009G050300 Gossypium raimondii HOM05D000433 ORTHO05D003991 8.4e-16 87.8 94 43.6
Manes.16G076200 Manihot esculenta HOM05D000433 ORTHO05D003991 8.4e-16 87.8 81 49.4
Psat5g021920 Pisum sativum HOM05D000433 ORTHO05D003991 8.4e-16 87.8 81 48.1
Potri.006G239300 Populus trichocarpa HOM05D000433 ORTHO05D003991 8.4e-16 87.8 95 44.2
MBI04_g27075_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 1.1e-15 87.4 78 48.7
Potri.018G043500 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.1e-15 87.4 91 46.2
FvH4_5g00520 Fragaria vesca HOM05D000433 ORTHO05D003991 1.4e-15 87.0 112 43.8
PGSC0003DMG400004311 Solanum tuberosum HOM05D000433 ORTHO05D003991 1.4e-15 87.0 86 50.0
TPR.G1375 Trifolium pratense HOM05D000433 ORTHO05D003991 1.4e-15 87.0 94 41.5
TPR.G35821 Trifolium pratense HOM05D000433 ORTHO05D003991 1.4e-15 87.0 106 38.7
HPP92_006323 Vanilla planifolia HOM05D000433 ORTHO05D003991 1.4e-15 87.0 91 44.0
CsaV3_3G048580 Cucumis sativus L. HOM05D000433 ORTHO05D013160 1.9e-15 86.7 78 50.0
Migut.E01520 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.9e-15 86.7 153 35.3
Migut.E01521 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.9e-15 86.7 145 33.8
Psat5g021960 Pisum sativum HOM05D000433 ORTHO05D003991 1.9e-15 86.7 84 46.4
arahy.Tifrunner.gnm1.ann1.66FUHL Arachis hypogaea HOM05D000433 ORTHO05D003991 2.4e-15 86.3 133 36.8
Os06g0162550 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 2.4e-15 86.3 81 49.4
Thecc.09G043800 Theobroma cacao HOM05D000433 ORTHO05D003991 2.4e-15 86.3 102 43.1
Nitab4.5_0009835g0010 Nicotiana tabacum HOM05D000433 ORTHO05D003991 3.2e-15 85.9 81 48.1
Oeu057713.1 Olea europaea HOM05D000433 ORTHO05D003991 3.2e-15 85.9 119 37.8
Sabra06G0187000 Salix brachista HOM05D000433 ORTHO05D003991 3.2e-15 85.9 93 45.2
Sabra18G0043500 Salix brachista HOM05D000433 ORTHO05D003991 3.2e-15 85.9 91 45.1
PGSC0003DMG400004312 Solanum tuberosum HOM05D000433 ORTHO05D003991 3.2e-15 85.9 86 50.0
MD08G1114800 Malus domestica HOM05D000433 ORTHO05D003991 4.2e-15 85.5 96 41.7
Sabra18G0043100 Salix brachista HOM05D000433 ORTHO05D003991 4.2e-15 85.5 91 45.1
Sabra18G0043300 Salix brachista HOM05D000433 ORTHO05D013160 4.2e-15 85.5 107 43.0
Medtr3g110195 Medicago truncatula HOM05D000433 ORTHO05D003991 7.1e-15 84.7 97 44.3
Ca_15599_v3 Cicer arietinum L. HOM05D000433 ORTHO05D003991 9.3e-15 84.3 81 45.7
Gohir.D05G049100 Gossypium hirsutum HOM05D000433 ORTHO05D003991 9.3e-15 84.3 90 43.3
Potri.018G043000 Populus trichocarpa HOM05D000433 ORTHO05D003991 9.3e-15 84.3 91 45.1
Sabra18G0043600 Salix brachista HOM05D000433 ORTHO05D003991 1.2e-14 84.0 91 45.1
HanXRQChr13g0401851 Helianthus annuus HOM05D000433 ORTHO05D003991 1.6e-14 83.6 87 40.2
HanXRQChr13g0401881 Helianthus annuus HOM05D000433 ORTHO05D003991 1.6e-14 83.6 87 40.2
Solyc08g066720.3 Solanum lycopersicum HOM05D000433 ORTHO05D003991 2.1e-14 83.2 79 46.8
Sopen08g020690 Solanum pennellii HOM05D000433 ORTHO05D003991 2.1e-14 83.2 79 46.8
Sabra18G0043200 Salix brachista HOM05D000433 ORTHO05D003991 2.7e-14 82.8 89 44.9
HPP92_027883 Vanilla planifolia HOM05D000433 ORTHO05D003991 2.7e-14 82.8 93 40.9
ATR0705G056 Amborella trichopoda HOM05D000433 ORTHO05D013160 4.6e-14 82.0 84 46.4
Manes.03G057900 Manihot esculenta HOM05D000433 ORTHO05D003991 4.6e-14 82.0 78 51.3
Cc08_g09420 Coffea canephora HOM05D000433 ORTHO05D003991 7.9e-14 81.3 103 37.9
CSS0016926 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.0e-13 80.9 117 37.6
Peaxi162Scf00227g00018 Petunia axillaris HOM05D000433 ORTHO05D003991 1.0e-13 80.9 124 33.1
Cc08_g09430 Coffea canephora HOM05D000433 ORTHO05D003991 3.9e-13 79.0 84 44.0
HanXRQChr17g0538661 Helianthus annuus HOM05D000433 ORTHO05D003991 3.9e-13 79.0 82 47.6
RcHm_v2.0_Chr6g0306131 Rosa chinensis HOM05D000433 ORTHO05D003991 3.9e-13 79.0 98 43.9
ECA233G3103 Erigeron canadensis HOM05D000433 ORTHO05D003991 6.7e-13 78.2 73 43.8
Eucgr.C02919 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.1e-12 77.4 134 35.1
FvH4_2g35670 Fragaria vesca HOM05D000433 ORTHO05D003991 1.1e-12 77.4 88 43.2
FAN20G2606 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.1e-12 77.4 88 43.2
Sabra18G0043000 Salix brachista HOM05D000433 ORTHO05D003991 1.1e-12 77.4 216 28.7
Haze_16805 Corylus avellana HOM05D000433 ORTHO05D003991 2.5e-12 76.3 141 34.0
MBI04_g27076_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 5.6e-12 75.1 81 48.1
RcHm_v2.0_Chr6g0306121 Rosa chinensis HOM05D000433 ORTHO05D003991 7.4e-12 74.7 54 61.1
Lsat_1_v5_gn_3_26320 Lactuca sativa HOM05D000433 ORTHO05D003991 9.6e-12 74.3 89 41.6
Lsat_1_v5_gn_3_26280 Lactuca sativa HOM05D000433 ORTHO05D003991 1.3e-11 73.9 84 44.0
Atru.chr1.3047 Acer truncatum HOM05D000433 ORTHO05D003991 1.6e-11 73.6 63 54.0
arahy.Tifrunner.gnm1.ann1.B2GMFE Arachis hypogaea HOM05D000433 ORTHO05D013160 2.1e-11 73.2 85 45.9
arahy.Tifrunner.gnm1.ann1.CEV0UN Arachis hypogaea HOM05D000433 ORTHO05D013160 2.1e-11 73.2 85 45.9
arahy.Tifrunner.gnm1.ann1.V9TV9N Arachis hypogaea HOM05D000433 ORTHO05D013160 2.1e-11 73.2 85 45.9
arahy.Tifrunner.gnm1.ann1.X3TKXF Arachis hypogaea HOM05D000433 ORTHO05D013160 2.1e-11 73.2 85 45.9
AagrBONN_evm.TU.Sc2ySwM_344.3718 Anthoceros agrestis HOM05D000433 ORTHO05D003991 3.7e-11 72.4 135 29.6
Cfa001732 Carpinus fangiana HOM05D000433 ORTHO05D003991 3.7e-11 72.4 183 28.4
Mapoly0012s0198 Marchantia polymorpha HOM05D000433 ORTHO05D003991 4.8e-11 72.0 74 43.2
Mapoly0012s0197 Marchantia polymorpha HOM05D000433 ORTHO05D003991 1.4e-10 70.5 75 40.0
AagrBONN_evm.TU.Sc2ySwM_344.3719 Anthoceros agrestis HOM05D000433 ORTHO05D003991 3.1e-10 69.3 77 41.6
Lsat_1_v5_gn_1_44240 Lactuca sativa HOM05D000433 ORTHO05D013160 3.1e-10 69.3 81 42.0
Mapoly0066s0017 Marchantia polymorpha HOM05D000433 ORTHO05D003991 6.9e-10 68.2 77 39.0
arahy.Tifrunner.gnm1.ann1.35913I Arachis hypogaea HOM05D000433 ORTHO05D013160 1.5e-09 67.0 85 40.0
Eucgr.C00514 Eucalyptus grandis HOM05D000433 ORTHO05D195200 1.5e-09 67.0 36 91.7
Nitab4.5_0007838g0050 Nicotiana tabacum HOM05D000433 ORTHO05D003991 7.6e-09 64.7 112 37.5
SMO244G0030 Selaginella moellendorffii HOM05D000433 ORTHO05D003991 7.6e-09 64.7 75 41.3
Haze_21881 Corylus avellana HOM05D000433 ORTHO05D003991 2.2e-08 63.2 50 54.0
Nitab4.5_0009835g0020 Nicotiana tabacum HOM05D000433 ORTHO05D003991 2.9e-08 62.8 82 40.2
arahy.Tifrunner.gnm1.ann1.2N484J Arachis hypogaea HOM05D000433 ORTHO05D013160 6.5e-08 61.6 74 41.9
Prupe.1G449100 Prunus persica HOM05D000433 ORTHO05D003991 8.4e-08 61.2 61 44.3
ECA246G0302 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.4e-07 60.5 66 47.0
ECA246G4238 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.4e-07 60.5 76 43.4
arahy.Tifrunner.gnm1.ann1.U7NLJQ Arachis hypogaea HOM05D000433 ORTHO05D013160 1.9e-07 60.1 53 50.9
ECA246G2703 Erigeron canadensis HOM05D000433 ORTHO05D003991 2.5e-07 59.7 66 47.0
Mapoly0056s0019 Marchantia polymorpha HOM05D000433 ORTHO05D003991 3.2e-07 59.3 83 34.9
Os08g0371608 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 5.5e-07 58.5 51 49.0
AagrBONN_evm.TU.Sc2ySwM_344.1384 Anthoceros agrestis HOM05D000433 ORTHO05D000443 7.1e-07 58.2 53 54.7
AagrBONN_evm.TU.Sc2ySwM_117.1612 Anthoceros agrestis HOM05D000433 ORTHO05D000443 9.3e-07 57.8 53 52.8
Glyma.06G085000 Glycine max HOM05D000433 ORTHO05D003991 9.3e-07 57.8 50 48.0
FAN18G1489 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.6e-06 57.0 50 50.0
Gohir.D05G049000 Gossypium hirsutum HOM05D000433 ORTHO05D003991 2.1e-06 56.6 61 39.3
Lj1g0021159 Lotus japonicus HOM05D000433 ORTHO05D013160 4.6e-06 55.5 48 43.8
CSS0012936 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 7.9e-06 54.7 53 45.3
FAN13G2375 Fragaria x ananassa HOM05D000433 ORTHO05D003991 7.9e-06 54.7 50 48.0


User provided reference genes

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