Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00431 Eucalyptus grandis HOM05D002291 ORTHO05D002496 1.1e-49 199.5 93 100.0
Eucgr.C00432 Eucalyptus grandis HOM05D002291 ORTHO05D002496 1.2e-24 116.3 80 67.5
Eucgr.C00430 Eucalyptus grandis HOM05D002291 ORTHO05D002496 4.1e-20 101.3 77 61.0
Cpa.g.sc46.89 Carica papaya HOM05D002291 ORTHO05D002496 3.5e-19 98.2 81 56.8
DCAR_014929 Daucus carota HOM05D002291 ORTHO05D002496 6.6e-18 94.0 83 53.0
Peaxi162Scf00347g00011 Petunia axillaris HOM05D002291 ORTHO05D002496 2.5e-17 92.0 91 49.5
PGSC0003DMG400030739 Solanum tuberosum HOM05D002291 ORTHO05D002496 2.5e-17 92.0 91 47.3
Actinidia04248 Actinidia chinensis HOM05D002291 ORTHO05D002496 4.3e-17 91.3 83 51.8
Cfa020886 Carpinus fangiana HOM05D002291 ORTHO05D002496 7.3e-17 90.5 83 59.0
Gohir.D06G049025 Gossypium hirsutum HOM05D002291 ORTHO05D002496 7.3e-17 90.5 80 56.2
Gorai.010G055600 Gossypium raimondii HOM05D002291 ORTHO05D002496 7.3e-17 90.5 80 56.2
Solyc07g007080.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 7.3e-17 90.5 83 49.4
COL.COLO4_24095 Corchorus olitorius HOM05D002291 ORTHO05D002496 9.6e-17 90.1 83 55.4
Manes.14G139301 Manihot esculenta HOM05D002291 ORTHO05D002496 9.6e-17 90.1 82 57.3
Hma1.2p1_0182F.1_g080530 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 2.8e-16 88.6 82 53.7
Thecc.09G142200 Theobroma cacao HOM05D002291 ORTHO05D002496 2.8e-16 88.6 93 48.4
PGSC0003DMG400030749 Solanum tuberosum HOM05D002291 ORTHO05D002496 3.6e-16 88.2 91 46.2
Phvul.003G175000 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 4.7e-16 87.8 79 50.6
Gohir.D06G049075 Gossypium hirsutum HOM05D002291 ORTHO05D002496 6.2e-16 87.4 80 58.8
Gorai.010G055800 Gossypium raimondii HOM05D002291 ORTHO05D002496 6.2e-16 87.4 80 58.8
Gohir.A06G049615 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.8e-15 85.9 94 52.1
Haze_19315 Corylus avellana HOM05D002291 ORTHO05D002496 3.1e-15 85.1 77 51.9
Gohir.D06G048932 Gossypium hirsutum HOM05D002291 ORTHO05D002496 5.2e-15 84.3 77 54.5
Gorai.010G055400 Gossypium raimondii HOM05D002291 ORTHO05D002496 5.2e-15 84.3 77 54.5
DCAR_014925 Daucus carota HOM05D002291 ORTHO05D002496 6.8e-15 84.0 79 48.1
DCAR_014926 Daucus carota HOM05D002291 ORTHO05D002496 6.8e-15 84.0 83 47.0
DCAR_014927 Daucus carota HOM05D002291 ORTHO05D002496 6.8e-15 84.0 83 47.0
DCAR_014928 Daucus carota HOM05D002291 ORTHO05D002496 6.8e-15 84.0 83 47.0
Peaxi162Scf00347g00003 Petunia axillaris HOM05D002291 ORTHO05D002496 6.8e-15 84.0 91 47.3
Eucgr.C00433 Eucalyptus grandis HOM05D002291 ORTHO05D002496 8.9e-15 83.6 77 49.4
Nitab4.5_0005384g0020 Nicotiana tabacum HOM05D002291 ORTHO05D002496 8.9e-15 83.6 80 50.0
Gohir.A06G049366 Gossypium hirsutum HOM05D002291 ORTHO05D002496 2.0e-14 82.4 77 54.5
QL02p091378 Quercus lobata HOM05D002291 ORTHO05D002496 2.0e-14 82.4 82 51.2
Oeu040786.1 Olea europaea HOM05D002291 ORTHO05D002496 3.4e-14 81.6 80 53.8
Gohir.A06G049449 Gossypium hirsutum HOM05D002291 ORTHO05D002496 4.4e-14 81.3 77 54.5
Nitab4.5_0001151g0160 Nicotiana tabacum HOM05D002291 ORTHO05D002496 4.4e-14 81.3 84 48.8
Nitab4.5_0001021g0030 Nicotiana tabacum HOM05D002291 ORTHO05D002496 5.8e-14 80.9 91 46.2
Migut.K00373 Erythranthe guttata HOM05D002291 ORTHO05D002496 7.6e-14 80.5 81 51.9
Glyma.13G157100 Glycine max HOM05D002291 ORTHO05D002496 7.6e-14 80.5 80 48.8
Haze_18941 Corylus avellana HOM05D002291 ORTHO05D002496 1.3e-13 79.7 76 51.3
Manes.14G139050 Manihot esculenta HOM05D002291 ORTHO05D002496 1.3e-13 79.7 79 50.6
Peaxi162Scf00347g00021 Petunia axillaris HOM05D002291 ORTHO05D002496 1.3e-13 79.7 88 46.6
Potri.006G189700 Populus trichocarpa HOM05D002291 ORTHO05D002496 1.7e-13 79.3 79 48.1
Migut.K00370 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.2e-13 79.0 80 52.5
Gohir.D06G048866 Gossypium hirsutum HOM05D002291 ORTHO05D002496 2.2e-13 79.0 78 53.8
Gorai.010G055300 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.2e-13 79.0 78 53.8
Gohir.D06G049050 Gossypium hirsutum HOM05D002291 ORTHO05D002496 2.9e-13 78.6 76 52.6
CANSAT11G1356 Cannabis sativa HOM05D002291 ORTHO05D002496 4.9e-13 77.8 74 50.0
Glyma.17G104700 Glycine max HOM05D002291 ORTHO05D002496 1.1e-12 76.6 78 47.4
Gohir.A06G049200 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.4e-12 76.3 93 41.9
Gorai.010G055100 Gossypium raimondii HOM05D002291 ORTHO05D002496 1.9e-12 75.9 93 41.9
RcHm_v2.0_Chr2g0086641 Rosa chinensis HOM05D002291 ORTHO05D002496 1.9e-12 75.9 69 49.3
Gorai.010G055700 Gossypium raimondii HOM05D002291 ORTHO05D002496 3.2e-12 75.1 76 51.3
Migut.K00372 Erythranthe guttata HOM05D002291 ORTHO05D002496 4.2e-12 74.7 78 46.2
Gohir.D06G048900 Gossypium hirsutum HOM05D002291 ORTHO05D002496 4.2e-12 74.7 93 39.8
COL.COLO4_24090 Corchorus olitorius HOM05D002291 ORTHO05D002496 7.1e-12 73.9 77 51.9
Migut.K00374 Erythranthe guttata HOM05D002291 ORTHO05D002496 7.1e-12 73.9 79 50.6
Medtr4g116640 Medicago truncatula HOM05D002291 ORTHO05D002496 7.1e-12 73.9 77 44.2
Prupe.7G254500 Prunus persica HOM05D002291 ORTHO05D002496 7.1e-12 73.9 75 49.3
Migut.K00371 Erythranthe guttata HOM05D002291 ORTHO05D002496 9.3e-12 73.6 80 45.0
COL.COLO4_24097 Corchorus olitorius HOM05D002291 ORTHO05D002496 1.6e-11 72.8 82 47.6
Potri.018G113901 Populus trichocarpa HOM05D002291 ORTHO05D002496 1.6e-11 72.8 69 46.4
QL02p091368 Quercus lobata HOM05D002291 ORTHO05D002496 1.6e-11 72.8 81 48.1
TPR.G15806 Trifolium pratense HOM05D002291 ORTHO05D002496 2.1e-11 72.4 77 42.9
Atru.chr7.210 Acer truncatum HOM05D002291 ORTHO05D002496 2.7e-11 72.0 81 49.4
FAN26G0066 Fragaria x ananassa HOM05D002291 ORTHO05D002496 2.7e-11 72.0 70 51.4
Gohir.A06G049700 Gossypium hirsutum HOM05D002291 ORTHO05D002496 2.7e-11 72.0 74 50.0
RcHm_v2.0_Chr2g0086611 Rosa chinensis HOM05D002291 ORTHO05D002496 2.7e-11 72.0 81 49.4
Gohir.A13G203300 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.5e-11 71.6 93 47.3
Medtr4g116620 Medicago truncatula HOM05D002291 ORTHO05D002496 3.5e-11 71.6 77 42.9
FAN28G2256 Fragaria x ananassa HOM05D002291 ORTHO05D002496 4.6e-11 71.2 70 51.4
Gohir.D13G208600 Gossypium hirsutum HOM05D002291 ORTHO05D002496 4.6e-11 71.2 93 47.3
Solyc07g007100.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 6.0e-11 70.9 80 50.0
Ciclev10010646m.g Citrus clementina HOM05D002291 ORTHO05D002496 7.8e-11 70.5 70 51.4
Hma1.2p1_1784F.1_g302180 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 7.8e-11 70.5 74 47.3
Hma1.2p1_2402F.1_g321405 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 7.8e-11 70.5 74 47.3
Gorai.013G237700 Gossypium raimondii HOM05D002291 ORTHO05D002496 1.0e-10 70.1 93 46.2
Hma1.2p1_0182F.1_g080570 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.0e-10 70.1 93 45.2
FAN23G1656 Fragaria x ananassa HOM05D002291 ORTHO05D000222 1.3e-10 69.7 70 51.4
Peaxi162Scf00347g00017 Petunia axillaris HOM05D002291 ORTHO05D002496 2.3e-10 68.9 89 46.1
Peaxi162Scf00177g00073 Petunia axillaris HOM05D002291 ORTHO05D002496 3.0e-10 68.6 91 44.0
Aqoxy6G00792 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.9e-10 68.2 79 44.3
Dinv43189 Davidia involucrata HOM05D002291 ORTHO05D002496 3.9e-10 68.2 80 47.5
Prupe.7G254000 Prunus persica HOM05D002291 ORTHO05D002496 5.1e-10 67.8 74 50.0
RcHm_v2.0_Chr2g0086591 Rosa chinensis HOM05D002291 ORTHO05D002496 6.6e-10 67.4 74 51.4
FvH4_1g01630 Fragaria vesca HOM05D002291 ORTHO05D002496 8.7e-10 67.0 78 44.9
Prupe.7G253900 Prunus persica HOM05D002291 ORTHO05D002496 8.7e-10 67.0 75 45.3
Hma1.2p1_0182F.1_g080520 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.5e-09 66.2 74 48.6
RcHm_v2.0_Chr2g0086601 Rosa chinensis HOM05D002291 ORTHO05D002496 1.5e-09 66.2 76 47.4
FvH4_1g01640 Fragaria vesca HOM05D002291 ORTHO05D002496 1.9e-09 65.9 70 48.6
FvH4_1g01670 Fragaria vesca HOM05D002291 ORTHO05D002496 1.9e-09 65.9 66 51.5
FAN19G2875 Fragaria x ananassa HOM05D002291 ORTHO05D002496 1.9e-09 65.9 87 44.8
FAN28G2220 Fragaria x ananassa HOM05D002291 ORTHO05D002496 1.9e-09 65.9 67 43.3
Solyc07g007050.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 1.9e-09 65.9 91 42.9
Aqoxy7G03527 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 2.5e-09 65.5 79 40.5
FAN23G0828 Fragaria x ananassa HOM05D002291 ORTHO05D002496 2.5e-09 65.5 57 47.4
Prupe.7G254300 Prunus persica HOM05D002291 ORTHO05D002496 2.5e-09 65.5 54 53.7
CSS0043235 Camellia sinensis var. sinensis HOM05D002291 ORTHO05D002496 3.3e-09 65.1 90 43.3
FAN28G1283 Fragaria x ananassa HOM05D002291 ORTHO05D002496 3.3e-09 65.1 57 50.9
Prupe.7G254100 Prunus persica HOM05D002291 ORTHO05D002496 3.3e-09 65.1 76 47.4
Solyc12g010400.2 Solanum lycopersicum HOM05D002291 ORTHO05D002496 4.3e-09 64.7 89 43.8
Sopen12g005420 Solanum pennellii HOM05D002291 ORTHO05D002496 4.3e-09 64.7 89 43.8
CSS0042018 Camellia sinensis var. sinensis HOM05D002291 ORTHO05D002496 5.6e-09 64.3 90 43.3
FAN19G2591 Fragaria x ananassa HOM05D002291 ORTHO05D002496 5.6e-09 64.3 59 52.5
Prupe.1G525100 Prunus persica HOM05D002291 ORTHO05D002496 5.6e-09 64.3 76 47.4
SalBow1G0319 Salvia bowleyana HOM05D002291 ORTHO05D002496 5.6e-09 64.3 75 46.7
Prupe.7G254200 Prunus persica HOM05D002291 ORTHO05D002496 7.3e-09 63.9 76 50.0
PGSC0003DMG400030741 Solanum tuberosum HOM05D002291 ORTHO05D002496 7.3e-09 63.9 91 45.1
PGSC0003DMG400030742 Solanum tuberosum HOM05D002291 ORTHO05D002496 7.3e-09 63.9 91 45.1
Ciclev10010215m.g Citrus clementina HOM05D002291 ORTHO05D002496 9.6e-09 63.5 61 52.5
MD15G1159300 Malus domestica HOM05D002291 ORTHO05D002496 9.6e-09 63.5 63 49.2
Sopen07g003120 Solanum pennellii HOM05D002291 ORTHO05D002496 9.6e-09 63.5 91 41.8
TAR626G1664 Trochodendron aralioides HOM05D002291 ORTHO05D002496 9.6e-09 63.5 58 51.7
Dinv41421 Davidia involucrata HOM05D002291 ORTHO05D002496 2.1e-08 62.4 69 49.3
Glyma.15G202600 Glycine max HOM05D002291 ORTHO05D002496 2.1e-08 62.4 85 36.5
Nn8g39724 Nelumbo nucifera HOM05D002291 ORTHO05D002496 2.1e-08 62.4 60 53.3
RcHm_v2.0_Chr2g0086581 Rosa chinensis HOM05D002291 ORTHO05D002496 2.1e-08 62.4 60 50.0
CAN.G518.9 Capsicum annuum HOM05D002291 ORTHO05D002496 2.8e-08 62.0 77 42.9
MD15G1158700 Malus domestica HOM05D002291 ORTHO05D002496 2.8e-08 62.0 80 42.5
MD15G1159500 Malus domestica HOM05D002291 ORTHO05D002496 2.8e-08 62.0 75 44.0
Nitab4.5_0001151g0070 Nicotiana tabacum HOM05D002291 ORTHO05D002496 2.8e-08 62.0 74 45.9
RcHm_v2.0_Chr2g0086491 Rosa chinensis HOM05D002291 ORTHO05D002496 2.8e-08 62.0 76 46.1
Solyc07g007070.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 2.8e-08 62.0 73 42.5
PGSC0003DMG401007888 Solanum tuberosum HOM05D002291 ORTHO05D002496 2.8e-08 62.0 84 39.3
Nn2g12256 Nelumbo nucifera HOM05D002291 ORTHO05D002496 3.6e-08 61.6 84 44.0
Aqoxy7G03523 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 4.8e-08 61.2 79 40.5
ECA240G4705 Erigeron canadensis HOM05D002291 ORTHO05D002496 4.8e-08 61.2 80 37.5
FvH4_1g01650 Fragaria vesca HOM05D002291 ORTHO05D002496 6.2e-08 60.8 65 46.2
MD15G1158800 Malus domestica HOM05D002291 ORTHO05D002496 6.2e-08 60.8 74 43.2
Nitab4.5_0001021g0010 Nicotiana tabacum HOM05D002291 ORTHO05D002496 6.2e-08 60.8 49 53.1
Migut.K00368 Erythranthe guttata HOM05D002291 ORTHO05D002496 8.1e-08 60.5 59 52.5
Oeu026098.1 Olea europaea HOM05D002291 ORTHO05D002496 8.1e-08 60.5 81 40.7
Sabra06G0145800 Salix brachista HOM05D002291 ORTHO05D002496 8.1e-08 60.5 80 43.8
Nitab4.5_0005330g0060 Nicotiana tabacum HOM05D002291 ORTHO05D002496 1.1e-07 60.1 89 42.7
Oeu052182.1 Olea europaea HOM05D002291 ORTHO05D002496 1.1e-07 60.1 86 43.0
Glyma.09G094900 Glycine max HOM05D002291 ORTHO05D002496 1.4e-07 59.7 86 33.7
MD15G1158900 Malus domestica HOM05D002291 ORTHO05D002496 1.4e-07 59.7 80 42.5
MD15G1159000 Malus domestica HOM05D002291 ORTHO05D002496 1.4e-07 59.7 80 42.5
Nn8g39725 Nelumbo nucifera HOM05D002850 ORTHO05D002496 1.4e-07 59.7 59 50.8
Potri.018G113700 Populus trichocarpa HOM05D002291 ORTHO05D002496 1.4e-07 59.7 80 42.5
HanXRQChr03g0064541 Helianthus annuus HOM05D002291 ORTHO05D002496 1.8e-07 59.3 75 42.7
MD15G1159200 Malus domestica HOM05D002291 ORTHO05D002496 1.8e-07 59.3 75 42.7
Migut.J01277 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.4e-07 58.9 54 44.4
Migut.K00369 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.4e-07 58.9 65 46.2
Nitab4.5_0001751g0020 Nicotiana tabacum HOM05D002291 ORTHO05D002496 2.4e-07 58.9 89 42.7
Prupe.7G254400 Prunus persica HOM05D002291 ORTHO05D002496 2.4e-07 58.9 76 43.4
Sp7g07240 Schrenkiella parvula HOM05D002291 ORTHO05D002496 2.4e-07 58.9 57 47.4
Aqoxy7G03526 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.1e-07 58.5 69 46.4
FvH4_1g01620 Fragaria vesca HOM05D002291 ORTHO05D002496 3.1e-07 58.5 66 42.4
Nn2g12255 Nelumbo nucifera HOM05D002291 ORTHO05D002496 3.1e-07 58.5 79 41.8
Potri.006G189600 Populus trichocarpa HOM05D002291 ORTHO05D002496 4.0e-07 58.2 85 42.4
QL02p091382 Quercus lobata HOM05D002291 ORTHO05D002496 4.0e-07 58.2 79 39.2
Gohir.D06G048766 Gossypium hirsutum HOM05D002291 ORTHO05D002496 5.3e-07 57.8 57 47.4
Gohir.D13G208700 Gossypium hirsutum HOM05D002291 ORTHO05D002496 5.3e-07 57.8 87 37.9
Gorai.013G237800 Gossypium raimondii HOM05D002291 ORTHO05D002496 5.3e-07 57.8 87 37.9
MBI15_g31410_MAGBIO Magnolia biondii HOM05D002291 ORTHO05D002496 6.9e-07 57.4 77 41.6
Sabra18G0096700 Salix brachista HOM05D002291 ORTHO05D002496 6.9e-07 57.4 60 45.0
Phvul.009G209300 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 9.0e-07 57.0 88 34.1
Ca_13603_v3 Cicer arietinum L. HOM05D002291 ORTHO05D002496 1.2e-06 56.6 80 40.0
Ca_30444_v3 Cicer arietinum L. HOM05D002291 ORTHO05D002496 1.2e-06 56.6 80 40.0
ClCG06G012060 Citrullus lanatus HOM05D002291 ORTHO05D002496 1.2e-06 56.6 73 38.4
CsaV3_1G028530 Cucumis sativus L. HOM05D002291 ORTHO05D002496 1.2e-06 56.6 76 38.2
Gohir.A13G203400 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.2e-06 56.6 87 36.8
Gorai.004G275000 Gossypium raimondii HOM05D002291 ORTHO05D002496 1.2e-06 56.6 80 40.0
HanXRQChr05g0143211 Helianthus annuus HOM05D002291 ORTHO05D002496 1.2e-06 56.6 74 37.8
Cfa020885 Carpinus fangiana HOM05D002291 ORTHO05D002496 2.0e-06 55.8 80 38.8
Lj5g0000889 Lotus japonicus HOM05D002291 ORTHO05D002496 2.0e-06 55.8 75 37.3
DCAR_014930 Daucus carota HOM05D002291 ORTHO05D002496 2.6e-06 55.5 69 37.7
Oeu038253.1 Olea europaea HOM05D002291 ORTHO05D002496 2.6e-06 55.5 82 42.7
Oeu040780.1 Olea europaea HOM05D002291 ORTHO05D002496 2.6e-06 55.5 81 38.3
DCAR_020908 Daucus carota HOM05D002291 ORTHO05D002496 3.4e-06 55.1 79 39.2
Migut.J01276 Erythranthe guttata HOM05D002291 ORTHO05D189699 3.4e-06 55.1 78 42.3
Aqoxy6G02828 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 4.4e-06 54.7 78 34.6
DCAR_017763 Daucus carota HOM05D002291 ORTHO05D002496 4.4e-06 54.7 54 44.4
Medtr2g461270 Medicago truncatula HOM05D002291 ORTHO05D002496 4.4e-06 54.7 82 35.4
Thecc.09G142300 Theobroma cacao HOM05D002291 ORTHO05D002496 5.8e-06 54.3 81 39.5
TWI34G1223 Tripterygium wilfordii HOM05D002291 ORTHO05D002496 5.8e-06 54.3 86 39.5
ECA236G3823 Erigeron canadensis HOM05D000006 ORTHO05D010593 7.6e-06 53.9 56 42.9
FvH4_1g01700 Fragaria vesca HOM05D002291 ORTHO05D002496 7.6e-06 53.9 68 44.1
FAN23G1547 Fragaria x ananassa HOM05D002291 ORTHO05D002496 7.6e-06 53.9 52 51.9
Lsat_1_v5_gn_7_47800 Lactuca sativa HOM05D002291 ORTHO05D002496 7.6e-06 53.9 74 40.5
unitig_748.g7183 Utricularia gibba HOM05D002291 ORTHO05D002496 7.6e-06 53.9 69 40.6
Glyma.13G157000 Glycine max HOM05D002291 ORTHO05D002496 9.9e-06 53.5 72 40.3
PSO832G3277 Papaver somniferum HOM05D002291 ORTHO05D002496 9.9e-06 53.5 40 52.5


User provided reference genes

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