Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.8e-109 399.4 223 100.0
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.6e-38 162.5 99 80.8
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 9.3e-34 147.9 92 76.1
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.6e-33 147.1 100 72.0
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 7.8e-33 144.8 99 70.7
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.7e-32 143.7 92 78.3
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 2.3e-32 143.3 92 76.1
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 3.9e-32 142.5 96 69.8
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 5.1e-32 142.1 100 69.0
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 6.6e-32 141.7 99 70.7
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 8.7e-32 141.4 94 72.3
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 1.5e-31 140.6 92 72.8
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.9e-31 140.2 100 68.0
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.3e-31 139.4 98 69.4
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 7.3e-31 138.3 88 75.0
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 9.6e-31 137.9 94 68.1
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 1.3e-30 137.5 92 70.7
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 1.3e-30 137.5 90 72.2
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.3e-30 137.5 92 70.7
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.6e-30 137.1 91 70.3
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 2.1e-30 136.7 92 67.4
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.8e-30 136.3 98 68.4
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 8.1e-30 134.8 102 65.7
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 8.1e-30 134.8 86 74.4
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 2.4e-29 133.3 97 66.0
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 2.4e-29 133.3 90 72.2
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 4.0e-29 132.5 96 64.6
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 4.0e-29 132.5 99 63.6
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 6.9e-29 131.7 79 78.5
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 1.2e-28 131.0 92 67.4
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 2.0e-28 130.2 80 73.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 2.6e-28 129.8 99 65.7
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 4.5e-28 129.0 92 63.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 7.6e-28 128.3 101 60.4
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 7.6e-28 128.3 99 61.6
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 9.9e-28 127.9 90 66.7
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.3e-27 127.5 96 61.5
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.3e-27 127.5 99 62.6
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.2e-27 126.7 90 67.8
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 2.2e-27 126.7 101 60.4
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 2.9e-27 126.3 101 59.4
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 2.9e-27 126.3 92 64.1
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 2.9e-27 126.3 92 64.1
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 2.9e-27 126.3 92 64.1
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 4.9e-27 125.6 86 72.1
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 4.9e-27 125.6 86 72.1
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 8.4e-27 124.8 90 66.7
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.1e-26 124.4 99 61.6
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.4e-26 124.0 92 63.0
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 2.4e-26 123.2 95 63.2
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 3.2e-26 122.9 88 67.0
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 4.2e-26 122.5 83 66.3
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 5.4e-26 122.1 77 77.9
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 7.1e-26 121.7 92 64.1
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.1e-26 121.7 85 69.4
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 7.1e-26 121.7 124 52.4
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 4.6e-25 119.0 92 60.9
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 4.6e-25 119.0 97 59.8
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 7.9e-25 118.2 102 58.8
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.3e-24 117.5 108 55.6
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 1.3e-24 117.5 84 71.4
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.8e-24 117.1 105 57.1
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 2.3e-24 116.7 89 62.9
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 3.0e-24 116.3 100 58.0
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 5.1e-24 115.5 92 60.9
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 5.1e-24 115.5 87 62.1
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.1e-23 114.4 89 62.9
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 5.6e-23 112.1 91 60.4
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 5.6e-23 112.1 86 60.5
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 5.6e-23 112.1 81 64.2
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 5.6e-23 112.1 71 73.2
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.3e-22 110.9 96 58.3
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 6.2e-22 108.6 88 60.2
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.1e-21 107.8 80 62.5
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 1.1e-21 107.8 67 73.1
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 3.1e-21 106.3 100 55.0
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 6.9e-21 105.1 77 67.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 6.9e-21 105.1 77 67.5
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 1.5e-20 104.0 83 61.4
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.0e-20 103.6 80 62.5
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 2.0e-20 103.6 92 55.4
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 2.0e-20 103.6 92 55.4
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.6e-20 103.2 69 66.7
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 3.4e-20 102.8 77 66.2
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 4.5e-20 102.4 77 66.2
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 4.5e-20 102.4 89 57.3
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 5.8e-20 102.1 92 59.8
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 9.9e-20 101.3 79 64.6
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 5.5e-18 95.5 102 52.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.6e-17 94.0 67 68.7
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 4.5e-12 75.9 80 38.8
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 7.6e-12 75.1 66 59.1
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 2.9e-11 73.2 51 62.7
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 3.2e-10 69.7 92 38.0
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 4.2e-10 69.3 41 80.5
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 7.1e-10 68.6 42 71.4
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 9.3e-10 68.2 40 75.0
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.3e-08 64.3 65 52.3
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 1.3e-08 64.3 67 46.3
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 3.9e-08 62.8 89 39.3
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 8.7e-08 61.6 65 50.8
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 5.7e-07 58.9 106 30.2
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 4.8e-06 55.8 92 32.6


User provided reference genes

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