Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 1.2e-209 733.0 388 100.0
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.5e-167 592.4 368 88.3
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.4e-165 586.6 367 87.5
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 1.8e-165 586.3 359 88.3
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 2.0e-164 582.8 368 87.8
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 7.4e-164 580.9 367 86.4
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 9.7e-164 580.5 369 87.3
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.7e-163 579.7 368 86.7
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 4.8e-163 578.2 367 86.9
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 8.2e-163 577.4 367 86.6
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 8.2e-163 577.4 367 86.6
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 1.8e-162 576.2 367 85.3
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 2.4e-162 575.9 358 86.9
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 4.1e-162 575.1 358 87.2
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 4.1e-162 575.1 358 87.7
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 5.3e-162 574.7 376 84.0
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 7.0e-162 574.3 367 85.3
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 9.1e-162 573.9 368 85.1
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 2.0e-161 572.8 359 86.1
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 3.5e-161 572.0 358 86.9
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 3.5e-161 572.0 367 86.4
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 5.9e-161 571.2 359 86.4
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 5.9e-161 571.2 367 84.2
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 7.7e-161 570.9 359 86.1
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.0e-160 570.5 367 85.0
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.2e-160 569.3 367 83.7
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 2.2e-160 569.3 368 85.3
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 3.8e-160 568.5 367 83.7
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.1e-159 567.0 367 84.2
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.2e-159 565.5 367 83.9
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 4.2e-159 565.1 367 84.5
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 9.4e-159 563.9 359 85.8
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 1.2e-158 563.5 367 85.0
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 3.6e-158 562.0 378 82.5
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 4.0e-157 558.5 367 81.7
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 1.2e-156 557.0 367 83.4
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 3.3e-156 555.4 368 83.2
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 1.3e-155 553.5 355 84.2
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 1.7e-155 553.1 355 83.1
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 1.4e-154 550.1 358 84.4
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 5.3e-154 548.1 359 82.5
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 1.6e-153 546.6 359 83.8
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 2.0e-153 546.2 348 85.6
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 1.0e-152 543.9 367 81.7
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 1.0e-152 543.9 359 83.0
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 2.9e-152 542.3 344 84.0
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 2.5e-151 539.3 367 80.9
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 6.1e-150 534.6 357 81.0
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.0e-149 533.9 368 81.8
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 3.0e-149 532.3 367 80.1
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 3.0e-149 532.3 367 79.0
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.6e-148 529.3 368 79.3
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 3.4e-148 528.9 344 83.4
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 5.7e-148 528.1 344 83.4
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 7.5e-148 527.7 353 80.5
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 7.5e-148 527.7 368 79.6
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 1.7e-147 526.6 367 78.7
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 4.8e-147 525.0 368 79.3
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 6.3e-147 524.6 369 77.8
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 3.1e-146 522.3 367 79.3
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 3.1e-146 522.3 352 81.5
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 9.1e-146 520.8 374 77.5
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 1.2e-145 520.4 349 80.8
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 2.7e-145 519.2 367 77.9
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 1.3e-144 516.9 367 78.5
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.7e-144 516.5 361 77.0
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.9e-144 515.8 367 77.4
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 6.6e-144 514.6 347 80.4
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 6.6e-144 514.6 347 80.4
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-143 513.8 347 80.4
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 1.1e-143 513.8 369 76.7
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.6e-142 510.0 404 72.3
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 1.6e-142 510.0 344 80.5
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 4.7e-142 508.4 349 79.9
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 4.7e-142 508.4 368 76.9
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 4.7e-142 508.4 368 76.9
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 6.1e-142 508.1 344 80.2
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 6.1e-142 508.1 407 71.7
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.4e-141 506.9 363 77.1
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 1.8e-141 506.5 362 76.2
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 2.0e-140 503.1 367 76.3
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 9.8e-140 500.7 368 75.0
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 2.2e-139 499.6 367 76.0
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 2.8e-139 499.2 367 74.4
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 1.1e-138 497.3 359 77.7
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.8e-138 496.5 361 75.3
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 3.1e-138 495.7 365 74.5
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 1.0e-136 490.7 367 76.3
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.0e-136 490.7 371 73.6
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.7e-136 490.0 352 78.1
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.9e-136 489.2 361 75.3
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.8e-136 488.8 367 75.5
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 6.6e-136 488.0 344 77.0
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 7.3e-135 484.6 359 75.5
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 7.3e-135 484.6 359 74.7
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 2.1e-134 483.0 344 78.5
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 1.4e-133 480.3 314 81.8
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.3e-133 479.6 361 74.0
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 5.2e-133 478.4 362 73.5
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 5.2e-133 478.4 298 89.3
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 6.8e-133 478.0 355 74.1
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 8.9e-133 477.6 362 74.0
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.5e-132 476.9 354 74.3
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 1.3e-131 473.8 369 72.9
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 3.7e-131 472.2 367 71.9
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 3.7e-131 472.2 343 75.8
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 1.9e-130 469.9 352 74.7
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 1.6e-129 466.8 344 74.7
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 3.5e-129 465.7 355 71.0
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 3.5e-129 465.7 344 74.4
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 7.8e-129 464.5 349 73.9
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 8.6e-128 461.1 362 71.8
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-127 460.7 344 73.8
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 1.1e-127 460.7 344 73.8
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 7.3e-127 458.0 357 69.2
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.1e-122 444.1 346 67.1
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 2.3e-120 436.4 347 70.6
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 3.1e-117 426.0 274 85.8
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 9.9e-116 421.0 267 86.1
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 2.9e-115 419.5 380 66.6
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.7e-115 419.1 349 63.3
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 7.1e-114 414.8 320 72.8
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 1.6e-113 413.7 292 79.8
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.6e-111 405.2 342 63.7
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.4e-108 395.6 294 74.5
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.4e-108 395.6 298 68.5
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 9.9e-108 394.4 368 63.9
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 2.2e-107 393.3 269 81.8
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 2.4e-106 389.8 343 61.8
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 3.2e-106 389.4 329 64.4
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 3.5e-105 386.0 270 78.9
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 2.3e-104 383.3 333 63.1
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 1.1e-101 374.4 218 92.2
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 9.9e-100 367.9 352 57.4
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.2e-98 362.8 310 69.4
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 2.9e-91 339.7 345 56.2
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 1.5e-87 327.4 288 66.3
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 5.8e-84 315.5 267 71.9
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 4.8e-70 269.2 174 82.8
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 2.5e-50 203.8 124 90.3
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 1.0e-43 181.8 118 82.2
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 6.1e-41 172.6 131 75.6
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 4.0e-40 169.9 124 72.6
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 8.8e-40 168.7 117 79.5
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 2.6e-31 140.6 105 70.5
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 4.9e-30 136.3 97 75.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 3.3e-26 123.6 79 73.4
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 4.2e-26 123.2 70 80.0
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 4.7e-25 119.8 81 82.7
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 5.2e-24 116.3 116 56.0
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-22 111.7 104 52.9
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 1.9e-18 97.8 58 93.1
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 2.5e-18 97.4 81 69.1
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 9.5e-18 95.5 130 50.0
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 4.0e-16 90.1 93 58.1
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 3.4e-15 87.0 53 90.6
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.1e-13 80.1 100 51.0
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 1.6e-12 78.2 130 44.6
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.7e-12 77.4 42 90.5
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 4.6e-12 76.6 71 52.1
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 1.3e-11 75.1 57 73.7
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 5.0e-11 73.2 249 28.5
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 1.4e-08 65.1 76 51.3
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 2.3e-08 64.3 38 92.1
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 3.1e-08 63.9 163 28.2


User provided reference genes

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