Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 2.4e-73 278.9 151 100.0
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 3.7e-34 148.7 117 64.1
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 6.3e-34 147.9 116 64.7
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 6.3e-34 147.9 118 70.3
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 1.1e-33 147.1 118 64.4
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 3.1e-33 145.6 121 71.1
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 9.1e-33 144.1 116 76.7
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 1.5e-32 143.3 116 62.1
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 3.4e-32 142.1 120 59.2
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 3.4e-32 142.1 121 73.6
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 3.4e-32 142.1 120 64.2
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 4.5e-32 141.7 132 53.8
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 5.9e-32 141.4 120 58.3
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 7.7e-32 141.0 123 68.3
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.0e-31 140.6 121 68.6
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 1.0e-31 140.6 127 69.3
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 1.7e-31 139.8 114 60.5
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 2.2e-31 139.4 129 62.8
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 3.8e-31 138.7 121 68.6
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 3.8e-31 138.7 120 73.3
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 6.5e-31 137.9 122 68.9
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 1.1e-30 137.1 116 59.5
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 1.4e-30 136.7 117 60.7
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 1.9e-30 136.3 115 66.1
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 1.9e-30 136.3 115 67.8
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 1.9e-30 136.3 123 69.9
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 2.5e-30 136.0 115 60.9
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 2.5e-30 136.0 112 59.8
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 2.5e-30 136.0 116 59.5
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 2.5e-30 136.0 122 60.7
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 3.2e-30 135.6 111 70.3
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 3.2e-30 135.6 126 55.6
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 4.2e-30 135.2 115 60.9
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 4.2e-30 135.2 115 60.9
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 4.2e-30 135.2 113 60.2
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 4.2e-30 135.2 115 60.9
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 4.2e-30 135.2 115 60.9
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 4.2e-30 135.2 115 60.9
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 5.5e-30 134.8 115 60.9
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 5.5e-30 134.8 115 74.8
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 5.5e-30 134.8 122 58.2
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 7.2e-30 134.4 114 61.4
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 9.4e-30 134.0 116 60.3
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 9.4e-30 134.0 127 67.7
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 1.2e-29 133.7 120 59.2
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 1.6e-29 133.3 114 60.5
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.6e-29 133.3 125 68.0
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 2.7e-29 132.5 122 65.6
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 2.7e-29 132.5 112 58.9
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 2.7e-29 132.5 115 59.1
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 4.6e-29 131.7 147 59.2
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 4.6e-29 131.7 119 55.5
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 6.1e-29 131.3 128 56.2
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 7.9e-29 131.0 120 58.3
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 7.9e-29 131.0 143 55.2
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 7.9e-29 131.0 117 65.0
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 1.0e-28 130.6 113 59.3
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 1.0e-28 130.6 114 59.6
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.4e-28 130.2 117 65.8
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 1.8e-28 129.8 114 59.6
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 1.8e-28 129.8 116 57.8
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 1.8e-28 129.8 122 59.0
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 3.0e-28 129.0 144 61.8
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 3.9e-28 128.6 116 57.8
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 3.9e-28 128.6 130 55.4
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 3.9e-28 128.6 117 59.0
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 5.1e-28 128.3 122 64.8
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 5.1e-28 128.3 127 65.4
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 6.7e-28 127.9 127 55.9
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 6.7e-28 127.9 117 58.1
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 6.7e-28 127.9 116 61.2
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 1.1e-27 127.1 125 56.0
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.1e-27 127.1 144 61.1
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.1e-27 127.1 144 61.1
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.1e-27 127.1 137 57.7
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 1.1e-27 127.1 126 68.3
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 1.5e-27 126.7 118 55.9
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 2.0e-27 126.3 116 56.9
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 2.0e-27 126.3 120 55.0
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 3.3e-27 125.6 121 66.1
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 4.4e-27 125.2 132 51.5
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 4.4e-27 125.2 121 62.8
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 5.7e-27 124.8 116 56.9
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 5.7e-27 124.8 123 67.5
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 2.2e-26 122.9 120 58.3
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 2.8e-26 122.5 114 57.9
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 2.8e-26 122.5 136 55.1
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 3.7e-26 122.1 119 61.3
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 8.2e-26 120.9 120 54.2
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 2.4e-25 119.4 131 48.1
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 3.1e-25 119.0 129 58.1
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 6.9e-25 117.9 110 51.8
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.2e-24 117.1 128 51.6
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 2.6e-24 115.9 125 64.0
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 3.4e-24 115.5 114 66.7
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 5.9e-24 114.8 161 50.9
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 1.3e-23 113.6 115 54.8
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 1.7e-23 113.2 152 47.4
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 2.9e-23 112.5 112 56.2
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 5.0e-23 111.7 117 59.0
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 8.5e-23 110.9 157 53.5
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 1.1e-22 110.5 135 44.4
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 2.5e-22 109.4 118 50.0
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 3.2e-22 109.0 119 50.4
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 4.2e-22 108.6 119 62.2
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 5.5e-22 108.2 133 45.9
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 9.4e-22 107.5 106 52.8
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 2.7e-21 105.9 130 61.5
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 2.7e-21 105.9 140 52.1
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 2.7e-21 105.9 117 47.0
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 3.6e-21 105.5 127 45.7
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 4.7e-21 105.1 102 52.9
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 4.7e-21 105.1 115 51.3
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 4.7e-21 105.1 134 46.3
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 4.7e-21 105.1 163 41.1
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 6.1e-21 104.8 116 50.9
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 1.0e-20 104.0 120 47.5
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.4e-20 103.6 110 51.8
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 1.4e-20 103.6 112 49.1
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 1.8e-20 103.2 112 56.2
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 1.8e-20 103.2 137 43.8
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 2.3e-20 102.8 163 39.3
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 3.9e-20 102.1 110 50.9
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 5.2e-20 101.7 106 51.9
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 5.2e-20 101.7 126 48.4
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 1.1e-19 100.5 112 50.0
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 1.5e-19 100.1 120 46.7
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 1.5e-19 100.1 110 59.1
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 2.0e-19 99.8 116 48.3
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 3.3e-19 99.0 154 39.6
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 4.4e-19 98.6 115 47.0
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 7.4e-19 97.8 118 46.6
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 9.7e-19 97.4 110 46.4
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 1.3e-18 97.1 138 41.3
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 1.3e-18 97.1 125 42.4
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 2.2e-18 96.3 125 45.6
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 1.1e-17 94.0 106 49.1
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 9.1e-17 90.9 97 50.5
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 3.8e-15 85.5 99 62.6
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 5.0e-15 85.1 110 44.5
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 1.5e-14 83.6 57 64.9
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 7.2e-14 81.3 147 37.4
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 1.6e-13 80.1 146 38.4
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 4.7e-13 78.6 107 46.7
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 8.0e-13 77.8 58 62.1
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 1.4e-12 77.0 95 48.4
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 1.5e-11 73.6 153 35.9
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.4e-09 67.0 124 34.7
Peaxi162Scf00627g00011 Petunia axillaris HOM05D004757 ORTHO05D005743 1.6e-08 63.5 96 41.7
Peaxi162Scf00200g00182 Petunia axillaris HOM05D004757 ORTHO05D005743 5.9e-08 61.6 98 39.8


User provided reference genes

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