Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 6.4e-93 344.0 161 100.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 3.6e-80 301.6 159 86.2
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.3e-79 298.9 158 83.5
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.2e-78 296.6 159 83.0
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.0e-78 295.8 158 83.5
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 5.8e-78 294.3 159 81.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.5e-78 293.9 158 82.9
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 4.9e-77 291.2 158 81.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 8.3e-77 290.4 159 81.1
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 83.5
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.4e-76 288.9 160 82.5
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 4.1e-76 288.1 159 83.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 9.2e-76 287.0 158 79.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 159 78.6
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 158 80.4
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.1e-75 285.8 158 81.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 79.6
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.5e-75 285.0 159 79.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.6e-75 284.6 159 79.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 158 79.7
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 7.8e-75 283.9 159 79.9
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.0e-74 283.5 159 78.6
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.0e-74 283.5 154 79.9
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.3e-74 283.1 159 78.6
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.7e-74 282.7 150 82.7
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.7e-74 282.7 158 81.0
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 2.3e-74 282.3 159 81.1
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.3e-74 282.3 158 79.1
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.3e-74 282.3 158 79.1
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.3e-74 282.3 158 78.5
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 3.0e-74 282.0 159 80.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 78.5
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.1e-74 281.2 159 77.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 6.6e-74 280.8 156 80.8
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 6.6e-74 280.8 159 78.0
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 8.6e-74 280.4 158 79.1
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 8.6e-74 280.4 158 78.5
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.1e-73 280.0 157 79.6
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.9e-73 279.3 155 81.9
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.3e-73 278.1 159 74.8
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 4.3e-73 278.1 159 74.8
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 5.6e-73 277.7 160 78.8
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 5.6e-73 277.7 159 74.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 5.6e-73 277.7 156 79.5
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 5.6e-73 277.7 156 79.5
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.6e-73 277.7 158 78.5
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.6e-73 277.7 158 78.5
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 5.6e-73 277.7 157 79.6
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 7.3e-73 277.3 159 74.2
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 9.5e-73 276.9 155 80.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 9.5e-73 276.9 155 80.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 9.5e-73 276.9 155 80.6
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.6e-72 276.2 159 73.6
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.6e-72 276.2 154 77.9
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.1e-72 275.8 158 78.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.1e-72 275.8 159 73.0
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.1e-72 275.8 156 78.8
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.1e-72 275.8 159 74.2
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 77.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 2.8e-72 275.4 154 77.9
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 2.8e-72 275.4 160 76.9
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.6e-72 275.0 158 76.6
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 4.7e-72 274.6 159 74.2
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.7e-72 274.6 149 81.2
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 6.2e-72 274.2 159 73.0
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 75.9
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.1e-71 273.5 158 76.6
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 4.0e-71 271.6 157 74.5
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 5.2e-71 271.2 159 73.0
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 5.2e-71 271.2 158 75.9
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.2e-70 270.0 169 70.4
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.2e-70 270.0 151 80.8
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 2.0e-70 269.2 167 70.7
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.0e-70 269.2 160 76.2
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 4.4e-70 268.1 158 75.3
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 9.9e-70 266.9 159 72.3
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 9.9e-70 266.9 156 75.0
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.7e-69 266.2 158 74.1
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.2e-69 265.8 149 76.5
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.9e-69 265.4 156 74.4
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 2.9e-69 265.4 157 72.6
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.4e-69 264.2 158 74.7
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 71.4
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 7.1e-68 260.8 157 74.5
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 9.2e-68 260.4 155 71.6
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.2e-67 260.0 160 72.5
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.2e-67 260.0 212 58.0
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 4.6e-67 258.1 158 75.9
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 7.8e-67 257.3 156 73.7
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 7.8e-67 257.3 155 71.0
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 3.0e-66 255.4 159 74.8
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 5.1e-66 254.6 158 72.8
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 8.6e-66 253.8 148 79.1
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.5e-65 252.3 154 72.1
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 6.2e-64 247.7 137 79.6
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 6.2e-64 247.7 149 70.5
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.5e-62 243.0 135 77.8
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.6e-62 242.3 135 77.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.4e-62 241.5 135 79.3
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.4e-60 235.7 138 77.5
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 4.2e-60 235.0 138 73.9
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.6e-59 233.0 157 64.3
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.1e-57 226.9 121 83.5
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 4.3e-57 224.9 152 68.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.6e-56 223.0 119 82.4
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 2.9e-53 212.2 108 84.3
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.9e-52 209.5 183 57.4
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.4e-52 208.0 116 79.3
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-50 203.4 114 78.1
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 8.7e-50 200.7 143 58.0
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.3e-49 198.7 160 62.5
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 3.3e-49 198.7 121 74.4
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.8e-48 194.9 143 57.3
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 4.8e-48 194.9 103 83.5
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.4e-47 192.6 145 55.2
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 7.6e-46 187.6 114 71.9
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.9e-44 183.0 130 61.5
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 7.1e-44 181.0 95 82.1
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 2.7e-43 179.1 96 78.1
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 7.4e-41 171.0 102 69.6
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 7.6e-38 161.0 157 54.1
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 6.5e-37 157.9 166 47.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.4e-36 156.8 135 58.5
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.6e-35 153.3 86 80.2
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.5e-33 146.7 85 76.5
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.8e-26 123.2 67 79.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.4e-20 103.6 52 86.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 3.7e-16 89.0 58 67.2
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 3.7e-08 62.4 69 43.5


User provided reference genes

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