Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00104 Eucalyptus grandis HOM05D007474 ORTHO05D009367 1.8e-31 138.7 70 100.0
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 5.0e-10 67.4 56 58.9
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 1.5e-09 65.9 57 57.9
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 1.5e-09 65.9 57 57.9
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 2.5e-09 65.1 57 52.6
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 5.5e-09 63.9 57 56.1
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 5.5e-09 63.9 58 56.9
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 7.2e-09 63.5 65 53.8
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 1.2e-08 62.8 57 54.4
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.2e-08 62.8 57 54.4
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.2e-08 62.8 56 58.9
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.6e-08 62.4 57 52.6
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 2.1e-08 62.0 56 58.9
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 2.7e-08 61.6 57 54.4
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.7e-08 61.6 60 50.0
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 3.6e-08 61.2 57 54.4
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.1e-08 60.5 57 50.9
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.4e-07 59.3 65 49.2
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.4e-07 59.3 56 53.6
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 1.8e-07 58.9 57 50.9
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 2.3e-07 58.5 57 50.9
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 5.2e-07 57.4 57 52.6
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.2e-06 56.2 56 50.0
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 2.0e-06 55.5 55 50.9
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 3.3e-06 54.7 57 50.9
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.4e-06 54.3 56 48.2
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 4.4e-06 54.3 58 46.6
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.7e-06 53.9 57 50.9
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 5.7e-06 53.9 57 50.9
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 5.7e-06 53.9 56 50.0
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 5.7e-06 53.9 56 48.2
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 7.5e-06 53.5 57 49.1


User provided reference genes

Program Settings