Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 3.3e-78 295.0 159 100.0
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 8.6e-42 174.1 152 59.2
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 5.2e-39 164.9 151 58.9
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 5.2e-39 164.9 151 58.9
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 5.2e-39 164.9 156 55.8
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 8.9e-39 164.1 145 61.4
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 5.8e-38 161.4 152 56.6
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 5.8e-38 161.4 146 58.2
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 9.8e-38 160.6 154 55.2
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 2.2e-37 159.5 155 54.8
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 2.9e-37 159.1 150 56.7
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 4.9e-37 158.3 143 59.4
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 1.1e-36 157.1 150 57.3
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.4e-36 156.8 143 59.4
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 1.9e-36 156.4 144 59.7
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 1.9e-36 156.4 150 56.0
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 2.4e-36 156.0 155 55.5
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 3.2e-36 155.6 146 57.5
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 4.1e-36 155.2 144 59.7
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 4.1e-36 155.2 155 54.2
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 5.4e-36 154.8 142 57.7
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 5.4e-36 154.8 147 56.5
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.4e-36 154.8 143 57.3
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 5.4e-36 154.8 146 58.2
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 7.1e-36 154.5 146 56.2
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.2e-35 153.7 156 55.1
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 1.2e-35 153.7 144 55.6
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 1.6e-35 153.3 146 58.2
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 2.1e-35 152.9 147 55.8
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 2.7e-35 152.5 151 57.0
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 3.5e-35 152.1 147 55.8
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 3.5e-35 152.1 142 57.0
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 1.3e-34 150.2 143 56.6
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.3e-34 150.2 143 56.6
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 2.3e-34 149.4 146 56.8
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 2.3e-34 149.4 148 56.8
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.0e-34 149.1 145 57.2
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 5.1e-34 148.3 147 54.4
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 5.1e-34 148.3 145 53.1
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 6.6e-34 147.9 147 55.1
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 8.6e-34 147.5 147 53.7
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 1.5e-33 146.7 174 52.9
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 1.9e-33 146.4 146 54.8
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 3.3e-33 145.6 147 53.1
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 3.3e-33 145.6 145 52.4
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 9.5e-33 144.1 148 55.4
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.2e-32 143.7 147 51.7
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.2e-32 143.7 147 51.7
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.6e-32 143.3 150 48.0
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 2.1e-32 142.9 145 50.3
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 2.8e-32 142.5 140 52.1
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 2.8e-32 142.5 143 53.8
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 2.8e-32 142.5 155 47.7
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.6e-32 142.1 145 53.8
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 4.7e-32 141.7 150 50.0
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.2e-32 141.4 145 55.2
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 1.1e-31 140.6 148 53.4
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.4e-31 140.2 139 54.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.8e-31 139.8 149 52.3
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 2.3e-31 139.4 124 62.9
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 2.3e-31 139.4 142 52.8
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 4.0e-31 138.7 139 54.7
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 5.2e-31 138.3 181 50.3
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 6.8e-31 137.9 139 51.8
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 1.2e-30 137.1 141 51.8
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 7.6e-30 134.4 143 49.0
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 9.9e-30 134.0 140 53.6
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 9.9e-30 134.0 144 49.3
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 1.4e-28 130.2 117 58.1
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 9.2e-28 127.5 137 51.1
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 1.3e-26 123.6 146 52.1
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 8.6e-26 120.9 119 53.8
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.5e-25 120.2 123 50.4
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 2.5e-25 119.4 123 50.4
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 2.1e-24 116.3 141 49.6
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 4.7e-24 115.2 141 45.4
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 3.1e-23 112.5 146 47.9
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 8.9e-23 110.9 153 46.4
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.2e-22 110.5 122 47.5
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 9.9e-22 107.5 146 45.2
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.9e-21 105.1 156 42.3
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.4e-20 102.8 134 46.3
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 4.2e-20 102.1 154 40.9
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.1e-19 99.8 146 43.2
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 7.8e-19 97.8 149 40.3
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.5e-17 93.6 136 43.4
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 2.8e-16 89.4 103 50.5
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 4.8e-16 88.6 78 57.7
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 9.0e-15 84.3 152 38.8
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 3.2e-12 75.9 97 45.4
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 3.0e-10 69.3 67 53.7
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 2.8e-08 62.8 61 52.5
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 3.6e-08 62.4 61 49.2


User provided reference genes

Program Settings