Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.4e-63 245.4 123 100.0
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.8e-63 243.8 123 99.2
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 6.5e-29 131.0 79 82.3
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 9.3e-28 127.1 84 73.8
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 1.2e-27 126.7 84 72.6
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 1.6e-27 126.3 79 77.2
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.6e-27 126.3 79 81.0
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 1.6e-27 126.3 84 72.6
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 1.6e-27 126.3 79 81.0
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 1.6e-27 126.3 79 81.0
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 2.7e-27 125.6 79 78.5
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 3.5e-27 125.2 79 77.2
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 3.5e-27 125.2 84 71.4
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 4.6e-27 124.8 79 79.7
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 6.0e-27 124.4 79 75.9
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 7.9e-27 124.0 79 75.9
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 7.9e-27 124.0 78 76.9
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 1.0e-26 123.6 79 77.2
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 1.3e-26 123.2 118 60.2
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.8e-26 122.9 78 76.9
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 2.3e-26 122.5 79 77.2
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 2.3e-26 122.5 79 79.7
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 2.3e-26 122.5 84 76.2
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 3.0e-26 122.1 79 75.9
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 3.0e-26 122.1 84 70.2
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 5.1e-26 121.3 84 71.4
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 6.7e-26 120.9 84 70.2
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 6.7e-26 120.9 84 70.2
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 6.7e-26 120.9 84 70.2
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 6.7e-26 120.9 84 70.2
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 6.7e-26 120.9 84 70.2
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 6.7e-26 120.9 77 80.5
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 8.7e-26 120.6 79 75.9
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 8.7e-26 120.6 84 73.8
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 8.7e-26 120.6 84 73.8
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 8.7e-26 120.6 79 77.2
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 8.7e-26 120.6 84 71.4
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 1.5e-25 119.8 84 70.2
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 1.5e-25 119.8 84 72.6
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.9e-25 119.4 79 74.7
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.9e-25 119.4 79 74.7
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 3.3e-25 118.6 83 71.1
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 3.3e-25 118.6 83 71.1
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.3e-25 118.6 118 58.5
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 4.3e-25 118.2 79 74.7
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 5.7e-25 117.9 84 67.9
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.7e-25 117.9 79 72.2
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 7.4e-25 117.5 83 69.9
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 7.4e-25 117.5 79 74.7
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 1.3e-24 116.7 79 74.7
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 1.3e-24 116.7 79 77.2
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.3e-24 116.7 84 69.0
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 1.6e-24 116.3 118 56.8
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 1.6e-24 116.3 79 74.7
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.2e-24 115.9 79 69.6
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.2e-24 115.9 79 69.6
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.8e-24 115.5 83 68.7
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 2.8e-24 115.5 83 68.7
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 2.8e-24 115.5 79 70.9
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.8e-24 115.5 83 68.7
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 3.7e-24 115.2 83 66.3
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.7e-24 115.2 118 57.6
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 3.7e-24 115.2 79 72.2
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 3.7e-24 115.2 79 73.4
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 4.8e-24 114.8 84 69.0
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 8.2e-24 114.0 88 69.3
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 1.4e-23 113.2 79 68.4
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 1.8e-23 112.8 83 67.5
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 1.8e-23 112.8 79 70.9
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 2.4e-23 112.5 79 70.9
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 2.4e-23 112.5 80 67.5
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 4.1e-23 111.7 79 69.6
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 6.9e-23 110.9 83 66.3
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 1.2e-22 110.2 83 65.1
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 1.5e-22 109.8 79 68.4
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 2.6e-22 109.0 81 66.7
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 3.4e-22 108.6 79 67.1
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 3.4e-22 108.6 81 65.4
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 3.4e-22 108.6 79 67.1
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 7.6e-22 107.5 80 66.2
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 1.0e-21 107.1 79 69.6
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.7e-21 106.3 111 53.2
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 3.8e-21 105.1 111 52.3
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 5.0e-21 104.8 102 55.9
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 5.0e-21 104.8 79 68.4
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 1.1e-20 103.6 68 75.0
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 3.2e-20 102.1 73 69.9
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 2.7e-19 99.0 87 57.5
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.3e-17 92.0 79 69.6
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 2.2e-16 89.4 79 59.5
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 1.8e-15 86.3 79 55.7
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 1.8e-15 86.3 76 56.6
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 6.9e-15 84.3 81 55.6
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 7.7e-14 80.9 48 83.3
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 2.9e-13 79.0 91 50.5
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.4e-12 76.6 48 75.0
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 1.9e-12 76.3 81 50.6
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.1e-10 68.2 48 68.8
SHI02119 Sapria himalayana HOM05D004656 ORTHO05D005404 3.3e-09 65.5 46 71.7
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 9.1e-07 57.4 85 42.4


User provided reference genes

Program Settings