Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 7.0e-262 906.7 457 100.0
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.0e-148 530.8 452 60.2
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 5.9e-144 515.0 453 59.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 6.3e-138 495.0 454 57.3
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.8e-137 493.4 462 55.8
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 4.1e-137 492.3 454 57.5
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 9.1e-137 491.1 453 57.8
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 2.0e-136 490.0 451 57.2
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 8.6e-135 484.6 451 55.2
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 1.1e-134 484.2 454 55.9
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.5e-134 483.8 458 57.2
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 4.2e-134 482.3 452 55.3
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 4.2e-134 482.3 455 57.4
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 8.0e-133 478.0 451 54.1
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 3.0e-132 476.1 454 54.4
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 2.6e-131 473.0 461 53.1
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 4.4e-131 472.2 454 55.5
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 5.7e-131 471.9 455 56.5
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.6e-128 463.8 452 53.3
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 3.5e-128 462.6 455 54.7
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 1.7e-127 460.3 459 51.9
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 2.3e-127 459.9 460 53.0
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 3.8e-127 459.1 459 52.3
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 5.0e-127 458.8 450 51.6
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 4.3e-126 455.7 454 54.2
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 4.7e-125 452.2 448 52.5
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 1.4e-124 450.7 449 53.2
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.8e-124 450.3 444 52.3
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.8e-124 450.3 438 55.3
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.3e-124 449.9 464 52.2
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 6.8e-124 448.4 464 51.7
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.0e-123 446.8 460 52.0
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 9.8e-123 444.5 450 52.4
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 4.9e-122 442.2 448 51.1
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 4.9e-122 442.2 449 52.3
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 1.8e-121 440.3 448 51.6
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.2e-121 439.5 460 50.7
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.4e-121 438.7 460 53.9
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.2e-120 437.6 407 57.0
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 2.0e-120 436.8 468 51.3
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 3.5e-120 436.0 450 50.9
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 5.9e-120 435.3 458 50.7
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 7.8e-120 434.9 460 51.5
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.0e-119 434.5 468 51.9
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 3.0e-119 433.0 453 50.8
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 3.9e-119 432.6 463 50.3
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.1e-118 431.0 449 51.9
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 1.1e-118 431.0 468 49.6
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.9e-118 430.3 449 51.4
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 2.5e-118 429.9 454 50.2
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 7.3e-118 428.3 463 49.0
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.6e-117 427.2 454 50.9
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.8e-117 426.4 454 50.9
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 2.8e-117 426.4 456 48.5
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 4.7e-117 425.6 499 47.1
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 4.7e-117 425.6 463 49.0
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 1.1e-116 424.5 457 49.0
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 4.0e-116 422.5 458 50.0
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 2.6e-115 419.9 448 50.7
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 4.4e-115 419.1 491 47.3
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 4.4e-115 419.1 457 47.7
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 5.8e-115 418.7 454 50.4
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 9.8e-115 417.9 450 49.8
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 1.3e-114 417.5 464 48.3
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 3.2e-113 412.9 461 49.2
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 9.2e-113 411.4 461 50.3
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 7.8e-112 408.3 386 54.4
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 1.3e-111 407.5 449 48.8
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.3e-111 407.5 454 47.1
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 1.3e-111 407.5 454 47.1
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 3.0e-111 406.4 454 47.6
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 5.0e-111 405.6 459 47.1
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 4.3e-110 402.5 441 48.5
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 4.3e-110 402.5 456 47.8
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 9.5e-110 401.4 453 47.7
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 3.6e-109 399.4 493 47.5
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 5.2e-108 395.6 451 47.0
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.0e-107 393.7 453 47.7
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 8.3e-106 388.3 434 46.5
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 2.7e-104 383.3 458 49.3
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 2.7e-104 383.3 458 47.6
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 6.6e-103 378.6 457 46.4
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 4.7e-101 372.5 474 45.1
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 3.1e-100 369.8 399 49.9
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 7.6e-99 365.2 459 43.4
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 3.2e-97 359.8 455 44.2
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 3.2e-97 359.8 448 47.5
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.3e-95 354.4 477 42.6
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 9.6e-94 348.2 554 39.7
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 9.6e-94 348.2 457 43.5
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 6.0e-88 328.9 368 50.0
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 3.9e-87 326.2 458 41.5
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.4e-84 317.8 331 52.3
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 3.1e-76 290.0 458 37.6
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 2.6e-75 287.0 349 43.3
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 4.2e-73 279.6 469 36.7
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 6.7e-71 272.3 365 40.5
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.5e-70 270.4 473 36.6
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 9.6e-70 268.5 230 61.3
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-69 268.1 456 37.1
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 2.8e-69 266.9 478 36.2
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 6.9e-68 262.3 349 44.1
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-66 258.1 450 36.7
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.6e-59 233.8 383 35.0
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 5.0e-58 229.6 292 43.2
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 2.9e-42 177.2 458 29.3
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 9.4e-41 172.2 187 45.5
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 8.0e-40 169.1 314 33.8
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 9.4e-33 145.6 398 28.1
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 8.8e-31 139.0 268 33.6
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 7.7e-27 125.9 215 32.1
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.7e-26 124.8 113 58.4
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 8.0e-24 115.9 423 26.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 2.3e-23 114.4 227 31.7
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.4e-20 105.1 135 43.7
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.0e-18 99.0 174 34.5
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.3e-18 98.6 84 57.1
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 6.6e-18 96.3 137 43.1
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 2.4e-12 77.8 111 37.8
SEGI_15616 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 7.5e-06 56.2 65 47.7


User provided reference genes

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