Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03921 Eucalyptus grandis HOM05D009419 ORTHO05D011473 1.6e-117 426.4 259 100.0
PGR102G2577 Punica granatum HOM05D009419 ORTHO05D011473 2.9e-39 166.4 268 42.2
PGR031G3289 Punica granatum HOM05D009419 ORTHO05D011473 3.9e-36 156.0 275 36.7
Dinv16239 Davidia involucrata HOM05D009419 ORTHO05D011473 1.2e-27 127.9 220 36.8
ClCG02G021680 Citrullus lanatus HOM05D009419 ORTHO05D011473 2.0e-27 127.1 218 35.3
Duzib150G0155 Durio zibethinus HOM05D009419 ORTHO05D011473 4.4e-27 125.9 216 37.5
COL.COLO4_19208 Corchorus olitorius HOM05D009419 ORTHO05D011473 7.5e-27 125.2 220 40.9
MELO3C026957.2 Cucumis melo HOM05D009419 ORTHO05D011473 1.7e-26 124.0 249 34.9
Ciclev10029167m.g Citrus clementina HOM05D009419 ORTHO05D011473 1.8e-25 120.6 258 35.7
CsaV3_6G014420 Cucumis sativus L. HOM05D009419 ORTHO05D011473 2.4e-25 120.2 234 35.0
Duzib168G0860 Durio zibethinus HOM05D009419 ORTHO05D011473 3.1e-25 119.8 229 35.4
Thecc.09G297700 Theobroma cacao HOM05D009419 ORTHO05D011473 5.3e-25 119.0 232 34.9
Gohir.D07G109200 Gossypium hirsutum HOM05D009419 ORTHO05D011473 1.2e-24 117.9 202 37.1
Gorai.001G117300 Gossypium raimondii HOM05D009419 ORTHO05D011473 1.2e-24 117.9 202 37.1
Gohir.A07G105100 Gossypium hirsutum HOM05D009419 ORTHO05D011473 7.7e-24 115.2 202 36.6
Sed0027206 Sechium edule HOM05D009419 ORTHO05D011473 2.2e-23 113.6 197 41.6
Nitab4.5_0003880g0030 Nicotiana tabacum HOM05D009419 ORTHO05D011473 1.8e-20 104.0 245 29.4
Peaxi162Scf00983g00005 Petunia axillaris HOM05D009419 ORTHO05D011473 2.3e-20 103.6 235 31.1
Nitab4.5_0000173g0200 Nicotiana tabacum HOM05D009419 ORTHO05D011473 3.1e-17 93.2 248 29.4
TAR633G1436 Trochodendron aralioides HOM05D009419 ORTHO05D011473 3.1e-17 93.2 269 29.4
CANSAT64G0909 Cannabis sativa HOM05D009419 ORTHO05D011473 7.0e-17 92.0 251 32.3
PSO801G0785 Papaver somniferum HOM05D009419 ORTHO05D011473 2.7e-16 90.1 257 26.5
PSO339G4034 Papaver somniferum HOM05D009419 ORTHO05D011473 8.6e-15 85.1 258 26.4
Sopen11g026210 Solanum pennellii HOM05D009419 ORTHO05D011473 3.3e-14 83.2 238 27.7
Solyc11g066460.1 Solanum lycopersicum HOM05D009419 ORTHO05D011473 2.1e-13 80.5 238 28.6
Nn2g13875 Nelumbo nucifera HOM05D009419 ORTHO05D011473 2.2e-10 70.5 127 33.9
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 5.9e-08 62.4 93 39.8
Migut.D02300 Erythranthe guttata HOM05D009419 ORTHO05D011473 5.9e-08 62.4 110 37.3
CsaV3_UNG143080 Cucumis sativus L. HOM05D009419 ORTHO05D011473 1.0e-07 61.6 64 48.4
CAN.G857.7 Capsicum annuum HOM05D000538 ORTHO05D000614 6.6e-07 58.9 103 35.0
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 6.6e-07 58.9 104 35.6
Ca_00207_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 8.6e-07 58.5 108 35.2
Dinv18944 Davidia involucrata HOM05D000538 ORTHO05D000614 1.1e-06 58.2 230 24.8
FAN25G1625 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.1e-06 58.2 275 26.2
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 1.5e-06 57.8 135 34.1
Hma1.2p1_0051F.1_g029560 Hydrangea macrophylla HOM05D009419 ORTHO05D011473 1.5e-06 57.8 68 45.6
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 1.5e-06 57.8 258 25.2
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.5e-06 57.0 104 33.7
Thecc.07G183500 Theobroma cacao HOM05D000538 ORTHO05D000614 3.3e-06 56.6 95 32.6
RcHm_v2.0_Chr5g0004541 Rosa chinensis HOM05D000538 ORTHO05D000614 4.3e-06 56.2 145 33.1
Lj2C275T5 Lonicera japonica HOM05D000538 ORTHO05D000614 7.3e-06 55.5 121 33.9
VMungo0540G1345 Vigna mungo HOM05D000538 ORTHO05D000614 7.3e-06 55.5 95 36.8
FvH4_3g02930 Fragaria vesca HOM05D000538 ORTHO05D000614 9.5e-06 55.1 144 30.6


User provided reference genes

Program Settings