Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03916 Eucalyptus grandis HOM05D005304 ORTHO05D004438 8.9e-54 213.4 111 100.0
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.9e-14 80.9 81 54.3
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 3.4e-13 78.6 80 61.2
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.4e-13 78.6 114 49.1
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 5.9e-13 77.8 87 54.0
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.6e-13 77.4 86 53.5
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 2.2e-12 75.9 118 48.3
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.9e-12 75.5 87 52.9
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 5.0e-12 74.7 100 52.0
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 1.4e-11 73.2 80 58.8
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 2.5e-11 72.4 110 48.2
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 4.2e-11 71.6 115 44.3
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 4.2e-11 71.6 114 50.0
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 9.4e-11 70.5 92 50.0
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.1e-10 69.3 116 44.0
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 7.9e-10 67.4 118 44.1
RcHm_v2.0_Chr5g0056381 Rosa chinensis HOM05D025255 ORTHO05D004438 7.9e-10 67.4 124 46.0
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.3e-09 65.9 86 45.3
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 3.0e-09 65.5 111 46.8
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.0e-09 65.5 81 51.9
Atru.chr3.3495 Acer truncatum HOM05D005304 ORTHO05D004438 5.1e-09 64.7 72 52.8
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-08 63.5 82 48.8
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 1.5e-08 63.2 102 42.2
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 1.5e-08 63.2 55 60.0
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.9e-08 62.8 61 55.7
FAN11G2118 Fragaria x ananassa HOM05D025255 ORTHO05D004438 4.3e-08 61.6 85 48.2
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 4.3e-08 61.6 108 41.7
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 5.7e-08 61.2 54 61.1
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 7.4e-08 60.8 92 46.7
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 9.7e-08 60.5 91 46.2
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 9.7e-08 60.5 100 46.0
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.3e-07 60.1 77 50.6
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 2.2e-07 59.3 80 52.5
ClCG01G013950 Citrullus lanatus HOM05D026992 ORTHO05D004438 2.2e-07 59.3 104 47.1
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.2e-07 59.3 97 43.3
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 3.7e-07 58.5 94 45.7
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 4.8e-07 58.2 93 47.3
MELO3C035553.2 Cucumis melo HOM05D026992 ORTHO05D004438 6.3e-07 57.8 105 44.8
Gorai.001G117700 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.3e-07 57.8 82 46.3
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 6.3e-07 57.8 103 39.8
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 6.3e-07 57.8 86 45.3
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 8.2e-07 57.4 57 52.6
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 8.2e-07 57.4 97 42.3
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.1e-06 57.0 99 40.4
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.4e-06 56.6 78 44.9
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 2.4e-06 55.8 73 49.3
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.4e-06 55.8 97 42.3
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 3.1e-06 55.5 73 47.9
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 3.1e-06 55.5 74 50.0
DCAR_018755 Daucus carota HOM05D055230 ORTHO05D045066 3.1e-06 55.5 101 43.6
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.1e-06 55.5 93 41.9
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 3.1e-06 55.5 89 44.9
FvH4_3g30440 Fragaria vesca HOM05D025255 ORTHO05D004438 4.1e-06 55.1 67 49.3
FAN16G1536 Fragaria x ananassa HOM05D025255 ORTHO05D004438 4.1e-06 55.1 122 40.2
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 5.3e-06 54.7 85 42.4
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 5.3e-06 54.7 92 42.4
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 5.3e-06 54.7 85 47.1
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 5.3e-06 54.7 98 42.9
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 9.1e-06 53.9 63 47.6
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 9.1e-06 53.9 106 39.6
PGR102G2181 Punica granatum HOM05D005304 ORTHO05D004438 9.1e-06 53.9 118 39.8


User provided reference genes

Program Settings