Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.0e-195 685.6 365 100.0
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 7.6e-126 454.5 360 65.6
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.2e-125 453.0 368 66.3
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 5.1e-122 441.8 363 66.7
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 1.1e-111 407.5 354 61.6
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.4e-111 407.1 367 60.8
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.2e-110 404.1 358 59.5
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 5.8e-110 401.7 330 63.6
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 5.8e-110 401.7 363 59.0
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 5.8e-110 401.7 337 62.6
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.8e-110 401.7 337 62.6
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.9e-109 399.4 350 60.0
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 2.9e-109 399.4 343 61.2
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.4e-109 398.3 337 62.3
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 6.4e-109 398.3 341 61.9
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 1.4e-108 397.1 347 60.2
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.4e-108 396.4 332 60.8
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 2.4e-108 396.4 341 60.4
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 2.4e-108 396.4 343 60.9
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 4.2e-108 395.6 343 60.3
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 4.2e-108 395.6 341 61.0
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 9.3e-108 394.4 341 61.3
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 3.5e-107 392.5 341 59.2
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.9e-106 389.0 352 59.7
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 6.7e-106 388.3 339 59.3
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.5e-105 387.1 366 57.1
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 4.3e-105 385.6 341 59.2
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 4.3e-105 385.6 341 58.7
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.4e-105 384.8 331 62.2
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 1.3e-104 384.0 342 58.5
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.1e-104 383.3 385 54.8
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 3.7e-104 382.5 341 58.7
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 3.7e-104 382.5 350 57.4
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 3.7e-104 382.5 341 57.5
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 4.8e-104 382.1 337 57.6
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 4.8e-104 382.1 330 58.5
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 6.2e-104 381.7 319 63.6
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.8e-103 380.2 322 62.7
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 3.1e-103 379.4 333 58.6
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 4.0e-103 379.0 362 57.5
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 5.3e-103 378.6 391 52.9
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 6.9e-103 378.3 366 54.9
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 9.0e-103 377.9 342 57.9
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 9.0e-103 377.9 341 56.3
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 2.0e-102 376.7 339 57.2
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.0e-102 376.7 356 55.3
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 2.0e-102 376.7 339 57.2
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.0e-102 376.7 333 58.0
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.6e-102 376.3 331 58.9
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 5.8e-102 375.2 341 56.9
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.3e-101 374.0 359 55.2
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 1.7e-101 373.6 348 56.9
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.7e-101 373.6 329 58.1
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 6.5e-101 371.7 331 58.3
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 6.5e-101 371.7 369 58.3
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 1.4e-100 370.5 343 58.3
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 1.9e-100 370.2 365 54.8
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 5.5e-100 368.6 340 55.3
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 5.5e-100 368.6 340 56.8
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 7.1e-100 368.2 343 55.4
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 9.3e-100 367.9 327 59.3
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 2.1e-99 366.7 341 56.9
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 6.0e-99 365.2 343 55.1
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.3e-98 363.2 347 54.5
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.3e-98 363.2 397 52.9
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 6.7e-98 361.7 332 56.6
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 8.7e-98 361.3 356 52.8
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.9e-97 360.1 343 56.6
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 9.6e-97 357.8 362 53.6
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 9.6e-97 357.8 364 53.3
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 1.3e-96 357.5 343 53.1
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 1.3e-96 357.5 327 57.8
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 3.7e-96 355.9 339 55.2
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 6.2e-96 355.1 446 48.4
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 1.4e-95 354.0 339 56.0
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 3.1e-95 352.8 328 57.3
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 5.3e-95 352.1 332 55.7
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 2.6e-94 349.7 315 60.0
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 3.8e-93 345.9 336 55.1
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.5e-93 345.1 383 53.0
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 4.6e-91 339.0 366 48.6
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 8.5e-85 318.2 285 56.8
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-84 315.1 283 56.9
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 1.1e-81 307.8 242 64.9
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.5e-81 307.4 278 57.9
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 6.9e-79 298.5 399 44.1
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 7.7e-78 295.0 344 50.9
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 7.2e-76 288.5 243 61.7
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 6.3e-72 275.4 304 51.3
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 3.1e-71 273.1 344 46.2
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 1.8e-66 257.3 218 58.3
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 5.2e-66 255.8 436 39.4
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.5e-65 254.2 338 46.4
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 9.7e-65 251.5 341 43.7
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 9.7e-65 251.5 210 60.0
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 7.7e-62 241.9 205 59.5
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 3.8e-61 239.6 227 56.4
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 3.2e-60 236.5 238 58.0
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 1.5e-57 227.6 254 48.4
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 2.6e-57 226.9 341 38.4
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 5.7e-57 225.7 364 40.4
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 1.3e-56 224.6 180 63.3
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 3.7e-56 223.0 332 41.6
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 8.3e-56 221.9 182 62.6
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.4e-55 221.1 181 62.4
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 2.4e-55 220.3 188 59.6
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 4.5e-54 216.1 234 54.3
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.3e-48 198.0 327 39.8
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 1.1e-44 184.9 233 48.9
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 4.7e-43 179.5 135 71.9
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.4e-39 167.9 237 46.0
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 1.4e-39 167.9 181 49.7
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.4e-39 167.2 339 36.0
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 1.7e-37 161.0 235 42.6
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 8.6e-37 158.7 342 33.0
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-36 157.1 227 38.8
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 9.5e-36 155.2 123 69.1
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 3.1e-34 150.2 127 59.1
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 4.9e-32 142.9 120 60.8
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 1.2e-30 138.3 148 48.6
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 1.6e-30 137.9 296 31.4
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 7.8e-30 135.6 330 34.2
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 1.3e-29 134.8 143 51.0
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.1e-28 131.7 326 29.8
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.0e-25 120.9 355 28.7
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.9e-24 116.3 409 27.9
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.9e-24 116.3 124 54.0
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.1e-23 113.2 82 72.0
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 6.0e-22 109.4 95 56.8
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.5e-20 104.8 102 53.9
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 1.9e-20 104.4 117 52.1
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 4.3e-20 103.2 101 53.5
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 7.3e-20 102.4 84 58.3
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 2.8e-19 100.5 75 68.0
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 2.0e-17 94.4 93 52.7
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.4e-17 93.2 108 49.1
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 7.6e-17 92.4 75 52.0
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.9e-16 90.5 65 75.4
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 6.4e-16 89.4 73 53.4
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 4.1e-15 86.7 73 50.7
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.7e-13 81.3 74 50.0
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 1.7e-13 81.3 74 51.4
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 6.6e-13 79.3 62 56.5
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 6.6e-13 79.3 85 44.7
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 5.6e-12 76.3 50 78.0
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 2.8e-11 73.9 102 42.2
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 2.4e-10 70.9 65 50.8
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.8e-10 69.3 44 72.7
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 1.3e-08 65.1 63 57.1
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 1.7e-08 64.7 235 26.4
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.9e-08 63.9 57 54.4
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 3.2e-07 60.5 334 26.3
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.5e-06 57.0 44 59.1


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