Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 9.3e-122 440.3 229 100.0
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 3.9e-112 408.3 226 91.6
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 2.5e-111 405.6 229 92.1
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 3.3e-111 405.2 227 91.6
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 7.4e-111 404.1 226 92.0
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 7.4e-111 404.1 229 91.3
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.3e-110 403.3 226 91.6
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.3e-110 403.3 226 91.6
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.6e-110 402.9 229 92.1
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.6e-110 402.9 229 92.1
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 6.2e-110 401.0 229 89.5
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 6.2e-110 401.0 229 90.8
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 8.1e-110 400.6 225 92.9
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 1.4e-109 399.8 229 90.0
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 1.8e-109 399.4 231 89.2
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 1.8e-109 399.4 227 90.7
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 3.1e-109 398.7 229 89.1
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 4.0e-109 398.3 234 87.6
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 4.0e-109 398.3 229 89.1
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 4.0e-109 398.3 227 89.9
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 4.0e-109 398.3 229 88.6
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 9.0e-109 397.1 231 88.7
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 9.0e-109 397.1 229 91.7
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 2.6e-108 395.6 229 90.0
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 3.4e-108 395.2 225 92.4
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 4.5e-108 394.8 228 89.9
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 5.8e-108 394.4 226 90.7
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 5.8e-108 394.4 228 90.8
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 7.6e-108 394.0 223 90.6
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 9.9e-108 393.7 232 88.4
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 1.3e-107 393.3 224 92.0
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 1.3e-107 393.3 224 90.6
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.3e-107 393.3 224 90.6
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 1.7e-107 392.9 222 88.7
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 2.2e-107 392.5 232 87.1
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 2.9e-107 392.1 229 89.1
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 4.9e-107 391.3 230 89.1
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 4.9e-107 391.3 228 89.0
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 4.9e-107 391.3 224 90.2
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 8.4e-107 390.6 223 91.5
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 8.4e-107 390.6 229 88.6
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 8.4e-107 390.6 226 88.5
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 1.1e-106 390.2 230 88.7
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.1e-106 390.2 235 87.7
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 1.4e-106 389.8 222 91.9
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 1.4e-106 389.8 232 87.1
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 1.9e-106 389.4 223 89.2
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 2.5e-106 389.0 226 90.3
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 2.5e-106 389.0 225 88.9
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 3.2e-106 388.7 226 89.4
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 3.2e-106 388.7 229 89.1
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.2e-106 388.7 225 90.7
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 4.2e-106 388.3 253 81.4
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.2e-106 388.3 229 89.1
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 4.2e-106 388.3 231 88.7
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 5.5e-106 387.9 223 89.2
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 7.1e-106 387.5 229 88.6
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 7.1e-106 387.5 231 88.3
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 9.3e-106 387.1 229 88.2
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 9.3e-106 387.1 225 88.4
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 1.2e-105 386.7 226 89.4
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 1.2e-105 386.7 226 89.8
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 1.6e-105 386.3 226 89.4
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 2.1e-105 386.0 223 90.1
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 89.4
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 88.5
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 89.4
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 89.4
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 4.6e-105 384.8 226 89.4
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 4.6e-105 384.8 232 87.1
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 6.0e-105 384.4 223 89.7
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 7.9e-105 384.0 229 86.9
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 2.3e-104 382.5 226 86.7
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 2.3e-104 382.5 226 88.1
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 2.3e-104 382.5 232 87.1
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 3.0e-104 382.1 226 87.6
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 3.0e-104 382.1 226 87.6
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 3.0e-104 382.1 227 87.2
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 3.0e-104 382.1 227 89.9
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 3.9e-104 381.7 229 85.2
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 8.7e-104 380.6 229 85.2
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 1.1e-103 380.2 212 93.4
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 1.1e-103 380.2 228 87.7
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 1.1e-103 380.2 213 92.0
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.5e-103 379.8 229 86.0
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 1.9e-103 379.4 225 88.4
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 1.9e-103 379.4 228 87.3
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 3.3e-103 378.6 212 92.9
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 3.3e-103 378.6 212 92.9
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 3.3e-103 378.6 212 92.9
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 4.3e-103 378.3 231 86.1
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 4.3e-103 378.3 212 92.5
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 4.3e-103 378.3 219 89.5
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 5.6e-103 377.9 230 87.0
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 7.4e-103 377.5 229 86.9
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 7.4e-103 377.5 226 88.5
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 1.3e-102 376.7 212 92.0
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 1.3e-102 376.7 228 86.8
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 1.3e-102 376.7 228 83.3
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 1.6e-102 376.3 228 87.7
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 2.1e-102 375.9 233 85.0
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 6.2e-102 374.4 231 84.8
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 8.2e-102 374.0 229 85.2
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 1.8e-101 372.9 221 86.9
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 5.3e-101 371.3 228 85.1
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 2.6e-100 369.0 229 84.3
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 2.6e-100 369.0 226 83.6
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 4.5e-100 368.2 226 85.0
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 2.2e-99 365.9 204 92.2
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 2.1e-97 359.4 295 67.5
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 2.1e-97 359.4 223 82.1
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 6.7e-96 354.4 229 82.5
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 5.9e-92 341.3 233 80.3
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 8.5e-91 337.4 192 91.1
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 1.5e-87 326.6 218 75.7
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 1.5e-87 326.6 208 80.3
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 3.3e-87 325.5 221 76.0
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 3.2e-82 308.9 189 86.8
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 2.1e-81 306.2 179 88.8
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 3.9e-80 302.0 191 85.9
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 5.7e-79 298.1 220 72.3
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 3.5e-76 288.9 158 96.2
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.0e-75 287.3 158 94.9
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.0e-75 287.3 161 93.2
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.8e-75 285.4 158 95.6
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 2.7e-73 279.3 177 81.4
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 3.0e-72 275.8 155 91.6
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 2.0e-71 273.1 158 89.9
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 3.3e-71 272.3 166 86.7
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.8e-70 269.2 186 76.3
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 3.7e-70 268.9 181 77.9
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 2.0e-63 246.5 160 80.0
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 2.6e-55 219.5 124 91.9
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 1.2e-52 210.7 161 73.3
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.4e-45 186.4 110 90.9
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 6.6e-43 178.3 103 90.3
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 4.3e-42 175.6 99 92.9
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.7e-36 156.4 158 57.0
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.1e-34 151.0 88 90.9
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 6.4e-30 135.2 79 83.5
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 1.6e-25 120.6 206 38.8
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 4.7e-25 119.0 81 79.0
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 7.6e-23 111.7 57 94.7
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 1.9e-21 107.1 63 79.4
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 3.3e-18 96.3 66 74.2
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 5.8e-15 85.5 65 64.6
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 1.9e-10 70.5 46 76.1


User provided reference genes

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