Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.6e-148 529.3 241 100.0
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.0e-107 393.7 242 71.1
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 9.5e-101 370.5 240 67.5
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 9.5e-101 370.5 241 67.2
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 4.0e-99 365.2 241 66.0
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 3.2e-96 355.5 239 65.3
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 7.0e-96 354.4 233 63.5
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.6e-95 353.2 243 65.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 6.0e-95 351.3 242 64.9
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.0e-94 350.5 241 63.1
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 6.6e-94 347.8 244 63.5
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 6.6e-94 347.8 244 63.5
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.1e-93 347.1 248 62.5
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 4.3e-93 345.1 238 62.2
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 5.6e-93 344.7 250 62.8
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 9.5e-93 344.0 239 62.3
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 4.7e-92 341.7 243 62.1
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 3.1e-91 339.0 241 63.9
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 5.2e-91 338.2 230 65.7
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 1.2e-90 337.0 236 63.1
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.6e-90 335.9 248 62.1
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 4.4e-90 335.1 228 64.5
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.7e-89 333.2 241 63.1
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.2e-89 332.8 239 62.3
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.9e-89 332.4 241 63.1
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 2.9e-89 332.4 241 61.8
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 2.4e-88 329.3 270 55.6
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.1e-88 328.6 241 59.8
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 5.4e-88 328.2 237 61.6
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 7.1e-88 327.8 241 62.7
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 3.5e-87 325.5 246 63.4
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 3.5e-87 325.5 246 63.4
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.5e-87 325.5 230 62.2
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 1.0e-86 323.9 230 60.9
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 5.1e-86 321.6 246 59.3
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.1e-85 320.5 233 58.8
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.5e-85 319.3 232 61.2
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 3.3e-85 318.9 210 66.2
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 5.6e-85 318.2 239 56.9
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 7.3e-85 317.8 242 57.4
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 7.3e-85 317.8 230 60.4
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 1.6e-84 316.6 232 60.8
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 3.6e-84 315.5 211 63.5
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 8.1e-84 314.3 217 62.7
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.1e-83 313.9 222 63.1
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.8e-83 313.2 242 55.8
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 2.3e-83 312.8 246 58.1
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 4.0e-83 312.0 228 59.2
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 4.0e-83 312.0 230 58.3
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 5.2e-83 311.6 264 59.8
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 6.8e-83 311.2 247 59.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 8.9e-83 310.8 223 61.0
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 1.2e-82 310.5 246 60.6
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.5e-82 310.1 242 56.6
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 2.0e-82 309.7 269 52.8
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 2.6e-82 309.3 242 59.1
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 4.4e-82 308.5 220 60.5
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 7.6e-82 307.8 247 57.1
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.7e-81 306.6 215 62.3
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 3.7e-81 305.4 240 59.2
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 3.7e-81 305.4 214 63.6
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 4.9e-81 305.1 247 56.7
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 6.4e-81 304.7 237 58.6
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 8.4e-81 304.3 246 58.9
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 4.1e-80 302.0 209 64.6
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 7.1e-80 301.2 247 60.3
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 7.1e-80 301.2 242 59.1
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.2e-79 300.4 244 58.6
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.6e-79 300.1 247 58.7
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 2.7e-79 299.3 249 55.0
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 2.7e-79 299.3 235 58.3
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 6.0e-79 298.1 261 52.5
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 7.8e-79 297.7 248 59.7
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.0e-78 295.8 218 61.9
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 5.1e-78 295.0 260 56.2
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 1.1e-77 293.9 273 54.9
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 4.3e-77 292.0 226 56.2
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 5.6e-77 291.6 247 59.1
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 7.3e-77 291.2 261 55.2
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 1.6e-76 290.0 249 55.8
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.6e-76 290.0 203 66.0
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 6.2e-76 288.1 201 61.7
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.8e-75 286.6 201 62.2
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.1e-75 285.8 173 74.0
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 3.1e-75 285.8 199 66.3
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 6.8e-75 284.6 235 57.4
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 6.8e-75 284.6 235 57.4
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 8.9e-75 284.3 245 53.5
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.2e-74 283.9 173 73.4
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.2e-74 283.9 173 73.4
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 2.0e-74 283.1 173 73.4
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 4.4e-74 282.0 233 56.2
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 7.6e-74 281.2 211 59.7
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.9e-73 279.3 233 56.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 4.9e-73 278.5 223 55.6
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.9e-72 276.6 232 55.6
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 7.8e-71 271.2 232 56.9
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 1.7e-70 270.0 228 58.8
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.1e-67 260.8 196 63.8
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.1e-67 260.8 196 63.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 5.8e-66 255.0 237 54.4
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 2.9e-65 252.7 206 59.2
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 2.9e-65 252.7 206 59.2
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.2e-63 247.3 227 52.4
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.3e-62 243.8 227 51.5
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.9e-62 242.3 228 50.9
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.8e-60 236.1 191 55.5
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 2.6e-58 229.6 176 58.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.9e-56 223.4 206 51.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 4.6e-55 218.8 160 60.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.5e-53 213.8 124 72.6
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 6.5e-49 198.4 121 66.9
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.0e-46 191.0 200 52.0
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.3e-38 163.3 122 58.2
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.8e-36 155.6 120 58.3
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 3.1e-35 152.9 120 56.7
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.6e-31 140.6 84 64.3
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.0e-29 133.7 81 67.9
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 4.8e-28 129.0 122 44.3
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.2e-12 77.0 156 32.7
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 7.2e-08 62.0 108 35.2


User provided reference genes

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