Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 9.2e-50 199.9 100 100.0
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.3e-43 179.5 96 91.7
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 4.1e-42 174.5 96 88.5
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 5.4e-42 174.1 95 88.4
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 3.5e-41 171.4 96 83.3
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 4.6e-41 171.0 96 85.4
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 7.8e-41 170.2 95 85.3
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.3e-40 169.5 96 84.4
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.3e-40 169.5 94 84.0
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.3e-40 168.7 95 85.3
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.0e-40 168.3 96 83.3
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.0e-40 168.3 96 83.3
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.9e-40 167.9 96 83.3
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.9e-40 167.9 96 83.3
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 6.6e-40 167.2 96 83.3
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 8.6e-40 166.8 96 86.5
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.1e-39 166.4 96 83.3
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.1e-39 166.4 98 83.7
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.5e-39 165.2 96 81.2
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 2.5e-39 165.2 97 80.4
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.5e-39 165.2 95 84.2
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 3.3e-39 164.9 95 80.0
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 3.3e-39 164.9 96 85.4
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 3.3e-39 164.9 99 87.9
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 3.3e-39 164.9 99 87.9
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 9.5e-39 163.3 93 81.7
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 1.6e-38 162.5 93 87.1
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 1.6e-38 162.5 96 83.3
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 1.6e-38 162.5 99 86.9
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 2.1e-38 162.2 93 87.1
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 2.8e-38 161.8 96 85.4
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 2.8e-38 161.8 96 85.4
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 2.8e-38 161.8 98 81.6
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 3.6e-38 161.4 95 81.1
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 3.6e-38 161.4 97 78.4
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 3.6e-38 161.4 97 78.4
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 3.6e-38 161.4 97 78.4
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 3.6e-38 161.4 97 78.4
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.6e-38 161.4 93 81.7
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 3.6e-38 161.4 93 81.7
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 4.7e-38 161.0 96 77.1
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 4.7e-38 161.0 98 85.7
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 6.2e-38 160.6 96 76.0
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 6.2e-38 160.6 96 83.3
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 6.2e-38 160.6 96 79.2
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 6.2e-38 160.6 96 78.1
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 6.2e-38 160.6 96 83.3
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 8.1e-38 160.2 93 81.7
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 1.1e-37 159.8 97 77.3
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 1.1e-37 159.8 97 77.3
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 1.1e-37 159.8 97 77.3
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 1.4e-37 159.5 97 77.3
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 1.4e-37 159.5 96 77.1
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 1.4e-37 159.5 100 80.0
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 1.4e-37 159.5 100 80.0
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 2.4e-37 158.7 97 77.3
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 2.4e-37 158.7 99 78.8
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 2.4e-37 158.7 96 76.0
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 2.4e-37 158.7 96 83.3
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 3.1e-37 158.3 96 80.2
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.1e-37 158.3 93 81.7
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 3.1e-37 158.3 93 81.7
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 6.8e-37 157.1 98 82.7
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 8.9e-37 156.8 96 81.2
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 1.2e-36 156.4 97 75.3
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.2e-36 156.4 97 76.3
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.2e-36 156.4 96 81.2
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.6e-36 155.2 93 79.6
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.6e-36 155.2 98 82.7
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 4.4e-36 154.5 96 77.1
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 5.8e-36 154.1 93 79.6
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 5.8e-36 154.1 98 77.6
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.3e-35 152.9 96 78.1
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.3e-35 152.9 97 81.4
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 1.7e-35 152.5 96 77.1
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 2.2e-35 152.1 98 76.5
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 2.9e-35 151.8 95 72.6
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 3.8e-35 151.4 96 78.1
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 6.4e-35 150.6 94 83.0
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 2.4e-34 148.7 93 78.5
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 4.2e-34 147.9 96 79.2
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 5.4e-34 147.5 102 72.5
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.4e-34 147.5 94 79.8
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.2e-33 146.4 96 81.2
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 1.6e-33 146.0 97 78.4
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 2.1e-33 145.6 97 74.2
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 2.1e-33 145.6 100 72.0
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 3.5e-33 144.8 97 70.1
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 6.0e-33 144.1 96 80.2
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 1.3e-32 142.9 96 78.1
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 6.6e-32 140.6 99 74.7
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 8.7e-32 140.2 99 74.7
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.5e-31 139.4 98 73.5
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.9e-31 139.0 94 75.5
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 1.9e-31 139.0 98 70.4
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.3e-31 138.3 99 73.7
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 9.6e-31 136.7 94 75.5
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 4.8e-30 134.4 93 75.3
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.1e-29 133.3 85 82.4
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.1e-29 133.3 85 82.4
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 3.1e-29 131.7 87 72.4
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 5.3e-29 131.0 96 69.8
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 6.9e-29 130.6 90 72.2
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 5.8e-28 127.5 81 75.3
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.7e-27 125.9 99 69.7
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 2.2e-27 125.6 95 65.3
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 2.9e-27 125.2 79 75.9
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 8.4e-27 123.6 98 71.4
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.9e-26 122.5 100 65.0
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.2e-25 119.8 88 62.5
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 3.9e-24 114.8 95 63.2
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 5.1e-24 114.4 98 59.2
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 9.6e-23 110.2 91 59.3
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.6e-22 109.4 69 79.7
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 2.8e-22 108.6 78 71.8
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 8.1e-22 107.1 91 59.3
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.8e-21 105.9 92 56.5
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.1e-21 105.1 96 55.2
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 9.0e-21 103.6 88 62.5
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.5e-20 102.8 89 62.9
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 7.1e-18 94.0 96 60.4
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.1e-17 92.4 99 47.5
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 3.7e-14 81.6 102 45.1
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 8.1e-14 80.5 100 46.0
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 2.4e-13 79.0 95 45.3
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 6.5e-11 70.9 40 75.0
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 8.4e-11 70.5 101 46.5
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.0e-08 63.5 56 58.9
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 3.0e-08 62.0 88 38.6
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 2.1e-06 55.8 44 70.5


User provided reference genes

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