Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 6.5e-50 200.3 92 100.0
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 2.0e-43 178.7 92 87.0
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.6e-43 178.3 92 89.1
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 7.7e-43 176.8 88 88.6
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 1.3e-42 176.0 92 87.0
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 1.7e-42 175.6 92 85.9
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 2.9e-42 174.9 92 87.0
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 5.0e-42 174.1 92 85.9
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 5.0e-42 174.1 92 85.9
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.1e-41 172.9 87 88.5
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.1e-41 172.9 87 88.5
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.4e-41 172.6 87 88.5
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.4e-41 172.6 92 87.0
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.9e-41 172.2 92 84.8
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.9e-41 172.2 92 85.9
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 2.5e-41 171.8 89 86.5
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 2.5e-41 171.8 89 85.4
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 4.2e-41 171.0 90 85.6
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 9.4e-41 169.9 84 90.5
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 9.4e-41 169.9 88 84.1
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 2.7e-40 168.3 92 82.6
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 4.7e-40 167.5 92 82.6
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 6.1e-40 167.2 88 84.1
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 7.9e-40 166.8 92 81.5
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 1.0e-39 166.4 87 85.1
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 1.8e-39 165.6 88 84.1
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 2.3e-39 165.2 84 85.7
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 3.9e-39 164.5 84 89.3
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 6.7e-39 163.7 89 82.0
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 6.7e-39 163.7 92 80.4
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 8.8e-39 163.3 84 86.9
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.5e-38 162.5 92 81.5
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.5e-38 162.5 86 83.7
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.5e-38 162.5 86 83.7
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.5e-38 162.5 86 83.7
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 2.0e-38 162.2 87 82.8
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 2.0e-38 162.2 93 79.6
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 2.6e-38 161.8 84 84.5
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 3.3e-38 161.4 87 80.5
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 3.3e-38 161.4 92 78.3
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 85.7
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.3e-38 161.4 92 80.4
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 4.4e-38 161.0 84 83.3
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 82.6
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 83.7
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 82.6
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 5.7e-38 160.6 92 78.3
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.3e-37 159.5 86 80.2
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 1.7e-37 159.1 86 77.9
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 82.4
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 82.4
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 82.4
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 2.8e-37 158.3 84 83.3
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.8e-37 158.3 87 83.9
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 3.7e-37 157.9 87 82.8
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 6.3e-37 157.1 93 75.3
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 8.2e-37 156.8 91 75.8
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 8.2e-37 156.8 90 76.7
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 8.2e-37 156.8 83 81.9
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.8e-36 155.6 84 82.1
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 1.8e-36 155.6 90 75.6
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 1.8e-36 155.6 90 75.6
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 1.8e-36 155.6 83 83.1
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.8e-36 155.6 83 83.1
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.8e-36 155.6 83 83.1
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.8e-36 155.6 83 83.1
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 1.8e-36 155.6 82 84.1
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.8e-36 155.6 86 80.2
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 1.8e-36 155.6 84 85.7
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 2.4e-36 155.2 85 80.0
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 3.1e-36 154.8 93 76.3
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 4.1e-36 154.5 82 81.7
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 7.0e-36 153.7 85 78.8
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 7.0e-36 153.7 86 81.4
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 7.0e-36 153.7 86 81.4
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 7.0e-36 153.7 86 79.1
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 1.2e-35 152.9 83 80.7
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.6e-35 152.5 89 75.3
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.6e-35 152.5 86 79.1
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.6e-35 152.5 86 79.1
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 2.0e-35 152.1 83 83.1
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 4.5e-35 151.0 84 78.6
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.5e-35 151.0 79 83.5
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.9e-35 150.6 80 85.0
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 5.9e-35 150.6 85 78.8
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 7.7e-35 150.2 84 81.0
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 1.0e-34 149.8 79 82.3
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.2e-34 148.7 83 78.3
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 2.2e-34 148.7 91 78.0
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 5.0e-34 147.5 84 78.6
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 5.0e-34 147.5 87 74.7
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 8.5e-34 146.7 86 75.6
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 8.5e-34 146.7 86 75.6
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 8.5e-34 146.7 86 75.6
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 8.5e-34 146.7 86 75.6
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 1.5e-33 146.0 92 71.7
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.9e-33 145.6 86 74.4
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.9e-33 145.6 86 74.4
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 2.5e-33 145.2 86 74.4
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.5e-33 145.2 86 74.4
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.5e-33 145.2 86 74.4
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.5e-33 145.2 86 74.4
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 4.2e-33 144.4 76 82.9
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 1.0e-31 139.8 90 68.9
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 8.8e-31 136.7 84 71.4
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 1.3e-29 132.9 90 67.8
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.7e-29 132.5 83 73.5
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 2.2e-29 132.1 85 69.4
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.2e-29 130.2 84 72.6
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 8.2e-29 130.2 88 68.2
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 1.1e-28 129.8 73 76.7
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.8e-28 129.0 88 68.2
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 7.0e-28 127.1 73 69.9
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 1.0e-26 123.2 84 66.7
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 1.0e-26 123.2 84 67.9
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.9e-26 121.7 88 62.5
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 6.3e-21 104.0 84 53.6
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.3e-21 103.6 70 68.6
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.3e-21 103.6 70 68.6
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.9e-19 97.4 52 76.9
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.3e-18 96.3 82 50.0
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 3.2e-17 91.7 78 52.6
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 4.4e-14 81.3 42 76.2
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 9.8e-14 80.1 78 44.9
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 3.1e-12 75.1 80 41.2
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 8.6e-10 67.0 87 49.4
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 2.5e-09 65.5 41 75.6
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 6.1e-08 60.8 69 47.8
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 2.6e-06 55.5 36 75.0
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 4.4e-06 54.7 36 72.2


User provided reference genes

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