Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03482 Eucalyptus grandis HOM05D000406 ORTHO05D194001 7.9e-67 256.9 124 100.0
Dinv13468 Davidia involucrata HOM05D000406 ORTHO05D003425 1.0e-10 70.5 113 33.6
MSTRG.12793 Avicennia marina HOM05D000406 ORTHO05D003425 6.8e-10 67.8 113 33.6
Rhsim13G0232300 Rhododendron simsii HOM05D000406 ORTHO05D003425 3.4e-09 65.5 113 32.7
vmacro04237 Vaccinium macrocarpon HOM05D000406 ORTHO05D003425 3.4e-09 65.5 113 32.7
THA.LOC104811077 Tarenaya hassleriana HOM05D000406 ORTHO05D003425 7.5e-09 64.3 113 31.9
CSS0017762 Camellia sinensis var. sinensis HOM05D000406 ORTHO05D003425 9.8e-09 63.9 113 32.7
MBI04_g12190_MAGBIO Magnolia biondii HOM05D000406 ORTHO05D003425 1.7e-08 63.2 113 31.0
AUR62040907 Chenopodium quinoa HOM05D000406 ORTHO05D003425 2.2e-08 62.8 113 32.7
Hund25535 Selenicereus undatus HOM05D000406 ORTHO05D003425 2.8e-08 62.4 113 31.0
AUR62019168 Chenopodium quinoa HOM05D000406 ORTHO05D003425 6.3e-08 61.2 113 31.9
THA.LOC104799052 Tarenaya hassleriana HOM05D000406 ORTHO05D003425 8.3e-08 60.8 113 30.1
A10p19960 Brassica napus HOM05D000406 ORTHO05D003425 1.1e-07 60.5 113 30.1
BraA10t44071Z Brassica rapa HOM05D000406 ORTHO05D003425 1.1e-07 60.5 113 30.1
BcaB05g23029 Brassica carinata HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
BcaC03g13707 Brassica carinata HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
BcaC04g19374 Brassica carinata HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
A02p05780 Brassica napus HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
BNapus_Darmor_BZH_scaffold_38p02150 Brassica napus HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
C09p56410 Brassica napus HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
BolC2t06978H Brassica oleracea HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
BolC9t58509H Brassica oleracea HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
BraA02t05530Z Brassica rapa HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
Carub.0006s1811 Capsella rubella HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 30.1
Cfa009567 Carpinus fangiana HOM05D000406 ORTHO05D003425 1.4e-07 60.1 113 29.2
BcaB08g36572 Brassica carinata HOM05D000406 ORTHO05D003425 1.8e-07 59.7 113 29.2
CARHR193140 Cardamine hirsuta HOM05D000406 ORTHO05D003425 1.8e-07 59.7 113 30.1
Haze_22946 Corylus avellana HOM05D000406 ORTHO05D003425 1.8e-07 59.7 113 29.2
BcaB01g04833 Brassica carinata HOM05D000406 ORTHO05D003425 2.4e-07 59.3 113 30.1
A03p09600 Brassica napus HOM05D000406 ORTHO05D003425 2.4e-07 59.3 113 30.1
BolC3t13587H Brassica oleracea HOM05D000406 ORTHO05D003425 2.4e-07 59.3 113 30.1
BraA03t10277Z Brassica rapa HOM05D000406 ORTHO05D003425 2.4e-07 59.3 113 30.1
Thhalv10014226m.g Eutrema salsugineum HOM05D000406 ORTHO05D003425 2.4e-07 59.3 113 30.1
THA.LOC104807534 Tarenaya hassleriana HOM05D000406 ORTHO05D003425 3.1e-07 58.9 113 31.0
Actinidia22077 Actinidia chinensis HOM05D000406 ORTHO05D000907 7.0e-07 57.8 113 30.1
vmacro12561 Vaccinium macrocarpon HOM05D000406 ORTHO05D003425 1.2e-06 57.0 113 30.1
RcHm_v2.0_Chr5g0083561 Rosa chinensis HOM05D000406 ORTHO05D019164 1.6e-06 56.6 108 34.3
Hund21629 Selenicereus undatus HOM05D000406 ORTHO05D003425 1.6e-06 56.6 113 31.0
Peaxi162Scf83467g00004 Petunia axillaris HOM05D000406 ORTHO05D003425 2.0e-06 56.2 116 34.5
RcHm_v2.0_Chr5g0083641 Rosa chinensis HOM05D000406 ORTHO05D019164 3.5e-06 55.5 108 34.3
MD11G1003900 Malus domestica HOM05D000406 ORTHO05D020716 7.7e-06 54.3 113 30.1


User provided reference genes

Program Settings