Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03446 Eucalyptus grandis HOM05D007096 ORTHO05D008288 5.1e-42 174.1 94 100.0
Potri.008G086100 Populus trichocarpa HOM05D007096 ORTHO05D008288 2.4e-15 85.5 94 53.2
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 3.1e-15 85.1 95 58.9
Potri.010G169300 Populus trichocarpa HOM05D007096 ORTHO05D008288 4.1e-15 84.7 94 51.1
Sabra08G0063800 Salix brachista HOM05D007096 ORTHO05D008288 9.0e-15 83.6 92 53.3
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 4.5e-14 81.3 96 54.2
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 7.7e-14 80.5 95 55.8
Sabra10G0129100 Salix brachista HOM05D007096 ORTHO05D008288 3.8e-13 78.2 94 46.8
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 6.1e-11 70.9 89 50.6
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 7.9e-11 70.5 89 48.3
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 1.0e-10 70.1 89 51.7
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 1.8e-10 69.3 86 51.2
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 8.8e-10 67.0 91 46.2
TAR371G0768 Trochodendron aralioides HOM05D007096 ORTHO05D008288 2.5e-09 65.5 94 46.8
CSS0036898 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 3.3e-09 65.1 88 50.0
CSS0038022 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 3.3e-09 65.1 88 50.0
Manes.01G185500 Manihot esculenta HOM05D007096 ORTHO05D008288 5.7e-09 64.3 95 44.2
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 5.7e-09 64.3 93 48.4
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 7.4e-09 63.9 91 48.4
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 9.7e-09 63.5 95 45.3
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 1.3e-08 63.2 93 44.1
DCAR_031024 Daucus carota HOM05D007096 ORTHO05D008288 1.4e-07 59.7 95 46.3
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 1.8e-07 59.3 94 44.7
Gohir.D05G304900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.4e-07 58.9 91 46.2
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 2.4e-07 58.9 89 43.8
Eucgr.G02504 Eucalyptus grandis HOM05D007096 ORTHO05D008288 5.3e-07 57.8 94 42.6
Lalb_Chr10g0098271 Lupinus albus HOM05D015099 ORTHO05D008288 5.3e-07 57.8 87 40.2
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 9.1e-07 57.0 94 43.6
Gohir.A05G183700 Gossypium hirsutum HOM05D007096 ORTHO05D008288 9.1e-07 57.0 91 45.1
CSS0030953 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.2e-06 56.6 97 46.4
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 1.5e-06 56.2 91 41.8
Gorai.009G324600 Gossypium raimondii HOM05D007096 ORTHO05D008288 1.5e-06 56.2 91 45.1
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 2.6e-06 55.5 97 44.3
RcHm_v2.0_Chr4g0439851 Rosa chinensis HOM05D007096 ORTHO05D008288 3.4e-06 55.1 90 43.3
Gohir.D12G168200 Gossypium hirsutum HOM05D007096 ORTHO05D008288 4.5e-06 54.7 89 43.8
Gorai.008G181100 Gossypium raimondii HOM05D007096 ORTHO05D008288 4.5e-06 54.7 89 43.8
Nitab4.5_0000145g0050 Nicotiana tabacum HOM05D007096 ORTHO05D008288 5.9e-06 54.3 85 43.5
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 7.7e-06 53.9 94 42.6


User provided reference genes

Program Settings