Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03411 Eucalyptus grandis HOM05D005067 ORTHO05D006105 3.5e-52 208.0 103 100.0
PGR102G0153 Punica granatum HOM05D005067 ORTHO05D006105 6.4e-38 160.6 103 77.7
arahy.Tifrunner.gnm1.ann1.35C0M2 Arachis hypogaea HOM05D005067 ORTHO05D006105 1.9e-34 149.1 101 73.3
arahy.Tifrunner.gnm1.ann1.75T26B Arachis hypogaea HOM05D005067 ORTHO05D006105 5.6e-34 147.5 101 72.3
arahy.Tifrunner.gnm1.ann1.MX8VGA Arachis hypogaea HOM05D005067 ORTHO05D006105 5.6e-34 147.5 101 72.3
arahy.Tifrunner.gnm1.ann1.S7KJ0A Arachis hypogaea HOM05D005067 ORTHO05D006105 7.3e-34 147.1 101 72.3
arahy.Tifrunner.gnm1.ann1.V7S8AY Arachis hypogaea HOM05D005067 ORTHO05D006105 7.3e-34 147.1 101 72.3
Phvul.009G181800 Phaseolus vulgaris HOM05D005067 ORTHO05D006105 9.5e-34 146.7 101 72.3
Lalb_Chr12g0209921 Lupinus albus HOM05D005067 ORTHO05D006105 1.2e-33 146.4 101 69.3
Glyma.06G185600 Glycine max HOM05D005067 ORTHO05D006105 2.8e-33 145.2 101 70.3
Gohir.D13G224500 Gossypium hirsutum HOM05D005067 ORTHO05D006105 2.8e-33 145.2 101 70.3
Medtr8g012945 Medicago truncatula HOM05D005067 ORTHO05D006105 2.8e-33 145.2 101 69.3
Potri.001G071900 Populus trichocarpa HOM05D005067 ORTHO05D006105 2.8e-33 145.2 102 68.6
GSVIVG01001135001 Vitis vinifera HOM05D005067 ORTHO05D006105 3.6e-33 144.8 102 68.6
arahy.Tifrunner.gnm1.ann1.WU9C10 Arachis hypogaea HOM05D005067 ORTHO05D006105 4.7e-33 144.4 101 71.3
Glyma.04G179100 Glycine max HOM05D005067 ORTHO05D006105 4.7e-33 144.4 101 70.3
CSS0001472 Camellia sinensis var. sinensis HOM05D005067 ORTHO05D006105 6.2e-33 144.1 102 69.6
CSS0007870 Camellia sinensis var. sinensis HOM05D005067 ORTHO05D006105 6.2e-33 144.1 102 69.6
Medtr2g034290 Medicago truncatula HOM05D005067 ORTHO05D006105 6.2e-33 144.1 101 69.3
TPR.G27257 Trifolium pratense HOM05D005067 ORTHO05D006105 6.2e-33 144.1 101 69.3
arahy.Tifrunner.gnm1.ann1.48UY8P Arachis hypogaea HOM05D005067 ORTHO05D006105 8.1e-33 143.7 101 70.3
Ca_01855_v3 Cicer arietinum L. HOM05D005067 ORTHO05D006105 8.1e-33 143.7 101 69.3
Actinidia23110 Actinidia chinensis HOM05D005067 ORTHO05D006105 1.1e-32 143.3 102 66.7
CANSAT01G3113 Cannabis sativa HOM05D005067 ORTHO05D006105 1.1e-32 143.3 101 68.3
Gorai.013G255300 Gossypium raimondii HOM05D005067 ORTHO05D006105 1.4e-32 142.9 101 69.3
Hund07355 Selenicereus undatus HOM05D005067 ORTHO05D006105 1.8e-32 142.5 101 67.3
vmacro05123 Vaccinium macrocarpon HOM05D005067 ORTHO05D006105 1.8e-32 142.5 102 66.7
AUR62013622 Chenopodium quinoa HOM05D005067 ORTHO05D006105 2.3e-32 142.1 101 68.3
Potri.003G159100 Populus trichocarpa HOM05D005067 ORTHO05D006105 2.3e-32 142.1 102 66.7
EL10Ac1g00908 Beta vulgaris HOM05D005067 ORTHO05D006105 3.1e-32 141.7 101 67.3
Cfa012979 Carpinus fangiana HOM05D005067 ORTHO05D006105 3.1e-32 141.7 102 67.6
Gohir.A13G220500 Gossypium hirsutum HOM05D005067 ORTHO05D006105 3.1e-32 141.7 101 68.3
Lsat_1_v5_gn_1_32740 Lactuca sativa HOM05D005067 ORTHO05D006105 3.1e-32 141.7 101 69.3
Sabra03G0115500 Salix brachista HOM05D005067 ORTHO05D006105 3.1e-32 141.7 102 66.7
Lj3g0015814 Lotus japonicus HOM05D005067 ORTHO05D006105 5.2e-32 141.0 101 67.3
TPR.G17128 Trifolium pratense HOM05D005067 ORTHO05D006105 5.2e-32 141.0 101 67.3
AUR62004226 Chenopodium quinoa HOM05D005067 ORTHO05D006105 6.8e-32 140.6 101 67.3
Duzib168G1737 Durio zibethinus HOM05D005067 ORTHO05D006105 6.8e-32 140.6 101 67.3
Gorai.006G119400 Gossypium raimondii HOM05D005067 ORTHO05D006105 6.8e-32 140.6 101 66.3
arahy.Tifrunner.gnm1.ann1.4NI9N6 Arachis hypogaea HOM05D005067 ORTHO05D006105 8.9e-32 140.2 101 69.3
Oeu003268.1 Olea europaea HOM05D005067 ORTHO05D006105 1.2e-31 139.8 102 66.7
Hma1.2p1_0738F.1_g211080 Hydrangea macrophylla HOM05D005067 ORTHO05D006105 1.5e-31 139.4 102 64.7
Psat1g160400 Pisum sativum HOM05D005067 ORTHO05D006105 1.5e-31 139.4 101 66.3
Haze_21343 Corylus avellana HOM05D005067 ORTHO05D006105 2.0e-31 139.0 102 65.7
Haze_21349 Corylus avellana HOM05D005067 ORTHO05D006105 2.0e-31 139.0 102 65.7
HanXRQChr05g0134241 Helianthus annuus HOM05D005067 ORTHO05D006105 2.0e-31 139.0 101 68.3
Sabra01G0050500 Salix brachista HOM05D005067 ORTHO05D006105 2.0e-31 139.0 113 62.8
CiPaw.06G112100 Carya illinoinensis HOM05D005067 ORTHO05D006105 3.4e-31 138.3 102 64.7
Prupe.4G224700 Prunus persica HOM05D005067 ORTHO05D006105 9.9e-31 136.7 102 63.7
Thecc.09G262100 Theobroma cacao HOM05D005067 ORTHO05D006105 9.9e-31 136.7 101 64.4
arahy.Tifrunner.gnm1.ann1.XUTR46 Arachis hypogaea HOM05D005067 ORTHO05D006105 1.7e-30 136.0 101 68.3
Ciclev10026832m.g Citrus clementina HOM05D005067 ORTHO05D006105 2.9e-30 135.2 101 65.3
Dinv26521 Davidia involucrata HOM05D005067 ORTHO05D006105 2.9e-30 135.2 102 63.7
MD03G1192500 Malus domestica HOM05D005067 ORTHO05D006105 2.9e-30 135.2 102 62.7
Manes.08G098600 Manihot esculenta HOM05D005067 ORTHO05D006105 2.9e-30 135.2 102 66.7
COL.COLO4_25264 Corchorus olitorius HOM05D005067 ORTHO05D006105 3.7e-30 134.8 101 63.4
ECA238G3917 Erigeron canadensis HOM05D005067 ORTHO05D006105 3.7e-30 134.8 97 69.1
Gohir.D09G102100 Gossypium hirsutum HOM05D005067 ORTHO05D006105 4.9e-30 134.4 101 64.4
MD11G1209000 Malus domestica HOM05D005067 ORTHO05D006105 8.3e-30 133.7 98 65.3
TAR723G0001 Trochodendron aralioides HOM05D005067 ORTHO05D006105 8.3e-30 133.7 101 62.4
MELO3C026758.2 Cucumis melo HOM05D005067 ORTHO05D006105 1.1e-29 133.3 102 63.7
FAN16G3498 Fragaria x ananassa HOM05D005067 ORTHO05D006105 1.1e-29 133.3 102 61.8
CiPaw.05G096900 Carya illinoinensis HOM05D005067 ORTHO05D006105 1.4e-29 132.9 102 62.7
FAN21G3427 Fragaria x ananassa HOM05D002614 ORTHO05D002794 1.4e-29 132.9 102 61.8
FAN25G2289 Fragaria x ananassa HOM05D005067 ORTHO05D006105 1.4e-29 132.9 102 61.8
PSO541G3634 Papaver somniferum HOM05D005067 ORTHO05D006105 1.4e-29 132.9 101 64.4
Hund21907 Selenicereus undatus HOM05D005067 ORTHO05D006105 1.4e-29 132.9 115 60.0
Duzib150G1019 Durio zibethinus HOM05D005067 ORTHO05D006105 1.9e-29 132.5 101 62.4
PSO675G6660 Papaver somniferum HOM05D005067 ORTHO05D006105 1.9e-29 132.5 101 64.4
Migut.D02119 Erythranthe guttata HOM05D005067 ORTHO05D006105 2.4e-29 132.1 101 63.4
FvH4_3g23621 Fragaria vesca HOM05D005067 ORTHO05D006105 3.2e-29 131.7 102 61.8
FAN11G0656 Fragaria x ananassa HOM05D001534 ORTHO05D003503 3.2e-29 131.7 102 61.8
HanXRQChr08g0228171 Helianthus annuus HOM05D005067 ORTHO05D006105 4.1e-29 131.3 101 61.4
RcHm_v2.0_Chr5g0041661 Rosa chinensis HOM05D005067 ORTHO05D006105 5.4e-29 131.0 102 60.8
Sed0016956 Sechium edule HOM05D005067 ORTHO05D006105 5.4e-29 131.0 102 62.7
Atru.chr12.1484 Acer truncatum HOM05D005067 ORTHO05D006105 1.6e-28 129.4 102 62.7
ATR0582G276 Amborella trichopoda HOM05D005067 ORTHO05D006105 2.7e-28 128.6 102 59.8
MSTRG.18590 Avicennia marina HOM05D005067 ORTHO05D006105 2.7e-28 128.6 101 61.4
Aa31LG3G14180 Aethionema arabicum HOM05D005067 ORTHO05D006105 7.8e-28 127.1 101 59.4
HPP92_001280 Vanilla planifolia HOM05D005067 ORTHO05D006105 1.0e-27 126.7 98 62.2
Aqoxy5G02883 Aquilegia oxysepala HOM05D005067 ORTHO05D006105 1.7e-27 125.9 101 60.4
BcaC03g17619 Brassica carinata HOM05D005067 ORTHO05D006105 2.3e-27 125.6 101 57.4
ClCG10G013160 Citrullus lanatus HOM05D005067 ORTHO05D006105 2.3e-27 125.6 143 47.6
Sp2g18390 Schrenkiella parvula HOM05D005067 ORTHO05D006105 2.3e-27 125.6 101 56.4
Sed0000673 Sechium edule HOM05D005067 ORTHO05D006105 2.3e-27 125.6 102 58.8
A02p37170 Brassica napus HOM05D005067 ORTHO05D006105 3.9e-27 124.8 101 57.4
BraA02t08703Z Brassica rapa HOM05D005067 ORTHO05D006105 3.9e-27 124.8 101 57.4
CDE02G2760 Ceratophyllum demersum HOM05D005067 ORTHO05D006105 5.1e-27 124.4 102 57.8
Cc01_g12390 Coffea canephora HOM05D005067 ORTHO05D006105 5.1e-27 124.4 102 59.8
BcaB07g30049 Brassica carinata HOM05D005067 ORTHO05D006105 8.6e-27 123.6 101 56.4
BcaC04g23800 Brassica carinata HOM05D005067 ORTHO05D006105 8.6e-27 123.6 101 56.4
BolC9t53383H Brassica oleracea HOM05D005067 ORTHO05D006105 8.6e-27 123.6 101 56.4
Carub.0014s0003 Capsella rubella HOM05D005067 ORTHO05D006105 8.6e-27 123.6 101 57.4
AT5G47890 Arabidopsis thaliana HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 56.4
A06p39480 Brassica napus HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 55.4
C02p56190 Brassica napus HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 55.4
C07p38790 Brassica napus HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 55.4
BolC7t44398H Brassica oleracea HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 55.4
BraA06t26863Z Brassica rapa HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 55.4
TWI18G1269 Tripterygium wilfordii HOM05D005067 ORTHO05D006105 1.1e-26 123.2 102 58.8
unitig_736.g22438 Utricularia gibba HOM05D005067 ORTHO05D006105 1.1e-26 123.2 101 58.4
Peaxi162Scf00679g00133 Petunia axillaris HOM05D005067 ORTHO05D006105 1.5e-26 122.9 102 59.8
THA.LOC104807181 Tarenaya hassleriana HOM05D005067 ORTHO05D006105 1.5e-26 122.9 101 57.4
Nitab4.5_0009655g0030 Nicotiana tabacum HOM05D005067 ORTHO05D006105 1.9e-26 122.5 102 58.8
C09p04540 Brassica napus HOM05D005067 ORTHO05D006105 2.5e-26 122.1 101 55.4
CDE02G0654 Ceratophyllum demersum HOM05D005067 ORTHO05D006105 3.3e-26 121.7 102 56.9
TWI36G0882 Tripterygium wilfordii HOM05D005067 ORTHO05D006105 3.3e-26 121.7 103 58.3
Lalb_Chr07g0194241 Lupinus albus HOM05D005067 ORTHO05D006105 4.3e-26 121.3 66 81.8
Actinidia14133 Actinidia chinensis HOM05D005067 ORTHO05D006105 5.6e-26 120.9 67 80.6
Psat0s3432g0200 Pisum sativum HOM05D005067 ORTHO05D006105 5.6e-26 120.9 71 77.5
MBI11_g22246_MAGBIO Magnolia biondii HOM05D005067 ORTHO05D006105 7.3e-26 120.6 94 62.8
AL8G19880 Arabidopsis lyrata HOM05D005067 ORTHO05D006105 9.5e-26 120.2 101 54.5
Nitab4.5_0002882g0010 Nicotiana tabacum HOM05D005067 ORTHO05D006105 1.6e-25 119.4 102 57.8
arahy.Tifrunner.gnm1.ann1.P4C6EV Arachis hypogaea HOM05D005067 ORTHO05D006105 2.8e-25 118.6 66 81.8
Solyc06g075810.3 Solanum lycopersicum HOM05D005067 ORTHO05D006105 3.6e-25 118.2 102 56.9
Sopen06g032240 Solanum pennellii HOM05D005067 ORTHO05D006105 3.6e-25 118.2 102 56.9
PGSC0003DMG400030398 Solanum tuberosum HOM05D005067 ORTHO05D006105 3.6e-25 118.2 102 56.9
Thhalv10005189m.g Eutrema salsugineum HOM05D005067 ORTHO05D006105 4.7e-25 117.9 101 54.5
Nitab4.5_0001953g0110 Nicotiana tabacum HOM05D005067 ORTHO05D006105 4.7e-25 117.9 102 56.9
Gohir.A09G105300 Gossypium hirsutum HOM05D005067 ORTHO05D006105 6.2e-25 117.5 69 73.9
CARHR184460 Cardamine hirsuta HOM05D005067 ORTHO05D006105 8.1e-25 117.1 101 53.5
BcaB04g19540 Brassica carinata HOM05D005067 ORTHO05D006105 3.1e-24 115.2 98 53.1
QL03p047951 Quercus lobata HOM05D005067 ORTHO05D006105 5.2e-24 114.4 66 78.8
PGSC0003DMG400015529 Solanum tuberosum HOM05D005067 ORTHO05D006105 5.2e-24 114.4 102 55.9
Zm00001eb283340 Zea mays HOM05D005067 ORTHO05D006105 6.8e-24 114.0 101 52.5
Glyma.06G272300 Glycine max HOM05D005067 ORTHO05D006105 2.0e-23 112.5 85 67.1
Mapoly0012s0093 Marchantia polymorpha HOM05D005067 ORTHO05D006105 2.6e-23 112.1 100 54.0
SMO119G0159 Selaginella moellendorffii HOM05D005067 ORTHO05D006105 9.9e-23 110.2 101 50.5
Sc03g0003970 Simmondsia chinensis HOM05D005067 ORTHO05D006105 9.9e-23 110.2 64 75.0
Zm00001eb345800 Zea mays HOM05D005067 ORTHO05D006105 9.9e-23 110.2 100 51.0
BolC2t11675H Brassica oleracea HOM05D005067 ORTHO05D006105 6.4e-22 107.5 137 42.3
SalBow3G2136 Salvia bowleyana HOM05D005067 ORTHO05D006105 5.4e-21 104.4 101 57.4
Pp3c20_8510 Physcomitrium patens HOM05D005067 ORTHO05D006105 2.7e-20 102.1 101 46.5
DCAR_005307 Daucus carota HOM05D005067 ORTHO05D006105 4.6e-20 101.3 64 68.8
SEGI_29862 Sequoiadendron giganteum HOM05D005067 ORTHO05D006105 7.8e-20 100.5 64 64.1
Glyma.02G198800 Glycine max HOM05D005067 ORTHO05D006105 2.3e-19 99.0 75 65.3
arahy.Tifrunner.gnm1.ann1.AQUA2C Arachis hypogaea HOM05D005067 ORTHO05D006105 3.0e-19 98.6 73 67.1
Os04g0310500 Oryza sativa ssp. japonica HOM05D005067 ORTHO05D006105 3.9e-19 98.2 64 64.1
arahy.Tifrunner.gnm1.ann1.8NA9N0 Arachis hypogaea HOM05D005067 ORTHO05D006105 6.6e-19 97.4 73 65.8
AagrBONN_evm.TU.Sc2ySwM_117.283 Anthoceros agrestis HOM05D005067 ORTHO05D006105 2.1e-17 92.4 97 46.4
TAR718G0005 Trochodendron aralioides HOM05D005067 ORTHO05D006105 2.8e-17 92.0 73 60.3
Cre16.g679500 Chlamydomonas reinhardtii HOM05D005067 ORTHO05D006105 1.7e-14 82.8 98 40.8
SHI02599 Sapria himalayana HOM05D005067 ORTHO05D006105 4.9e-14 81.3 73 56.2
Pp3c23_15790 Physcomitrium patens HOM05D005067 ORTHO05D006105 1.4e-13 79.7 62 53.2
PRCOL_00006750 Prasinoderma coloniale HOM05D005067 ORTHO05D006105 1.4e-13 79.7 100 40.0
unitig_899.g14896 Utricularia gibba HOM05D005067 ORTHO05D006105 2.1e-12 75.9 66 56.1
MCO03G395 Micromonas commoda HOM05D005067 ORTHO05D006105 6.2e-09 64.3 93 37.6
Nitab4.5_0009487g0020 Nicotiana tabacum HOM05D005067 ORTHO05D006105 9.0e-08 60.5 104 39.4


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