Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 7.1e-94 347.4 199 100.0
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 5.1e-60 235.0 199 72.4
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 7.7e-56 221.1 202 63.9
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 2.2e-55 219.5 199 60.3
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 3.8e-55 218.8 193 72.5
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 5.0e-55 218.4 200 61.5
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.9e-54 216.5 203 72.9
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 4.2e-54 215.3 200 69.5
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 9.4e-54 214.2 202 59.9
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 2.1e-53 213.0 200 69.0
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 2.7e-53 212.6 199 61.3
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 3.6e-53 212.2 206 59.7
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 7.9e-53 211.1 200 69.5
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.4e-52 210.3 201 60.2
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 6.7e-52 208.0 199 57.3
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.1e-51 207.2 208 57.7
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 2.6e-51 206.1 201 57.7
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 3.3e-51 205.7 201 59.2
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 7.4e-51 204.5 199 63.3
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 9.7e-51 204.1 201 62.2
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.7e-50 203.4 201 57.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 2.2e-50 203.0 201 60.7
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 2.2e-50 203.0 201 59.2
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 3.7e-50 202.2 201 58.2
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 4.8e-50 201.8 201 57.2
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 8.2e-50 201.1 201 58.7
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.1e-49 199.1 207 58.5
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 9.1e-49 197.6 210 58.6
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.2e-48 197.2 207 57.0
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.6e-48 196.8 207 56.0
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 7.7e-48 194.5 208 57.7
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.0e-47 194.1 202 57.4
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 1.3e-47 193.7 199 56.3
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 3.8e-47 192.2 201 57.2
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.0e-47 191.8 200 53.0
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 5.0e-47 191.8 228 50.9
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 5.0e-47 191.8 148 68.2
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 5.0e-47 191.8 200 54.0
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.5e-46 190.3 205 53.2
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 1.9e-46 189.9 199 55.8
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 5.5e-46 188.3 200 53.0
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 6.1e-45 184.9 149 65.1
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 6.7e-44 181.4 199 55.3
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 1.2e-43 180.6 153 63.4
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.4e-43 178.7 199 50.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 5.7e-43 178.3 192 56.2
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 5.7e-43 178.3 211 49.3
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.3e-42 177.2 207 53.6
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.3e-42 177.2 199 59.3
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 2.8e-42 176.0 209 50.2
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 6.3e-42 174.9 206 50.5
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 8.2e-42 174.5 210 54.8
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.1e-41 174.1 148 62.2
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.4e-41 173.7 206 55.3
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 2.4e-41 172.9 216 51.9
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 2.4e-41 172.9 216 49.1
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 3.1e-41 172.6 152 61.2
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 9.1e-41 171.0 209 50.7
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 1.2e-40 170.6 206 49.5
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 1.2e-40 170.6 206 49.5
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 2.0e-40 169.9 209 48.3
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.0e-40 169.9 209 58.9
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.5e-40 169.1 210 49.0
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 5.9e-40 168.3 211 49.3
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.7e-39 166.8 203 48.3
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 8.5e-39 164.5 163 56.4
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 1.1e-38 164.1 218 50.9
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.5e-38 163.7 175 53.1
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.5e-38 163.7 200 49.0
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.7e-37 158.7 223 45.7
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 8.0e-37 157.9 226 49.1
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 8.0e-37 157.9 219 44.7
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.4e-36 157.1 219 44.7
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.4e-36 157.1 209 48.3
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 4.0e-36 155.6 212 52.8
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 4.0e-36 155.6 219 46.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 6.8e-36 154.8 212 45.3
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.2e-35 154.1 212 45.3
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.2e-35 154.1 212 45.3
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.6e-35 152.9 209 47.4
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 3.4e-35 152.5 203 48.8
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 4.4e-35 152.1 203 49.3
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.1e-33 147.5 232 41.8
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 5.4e-33 145.2 198 44.9
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 3.5e-32 142.5 208 41.8
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 2.2e-31 139.8 208 42.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 5.0e-31 138.7 205 51.2
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 8.5e-31 137.9 148 50.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 2.5e-30 136.3 253 39.1
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.5e-30 136.3 206 41.3
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.5e-30 135.2 230 47.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 4.7e-29 132.1 200 41.0
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.2e-26 123.2 123 69.1
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 4.9e-26 122.1 160 47.5
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.2e-24 117.5 151 45.0
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 7.8e-24 114.8 131 64.1
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.7e-23 113.6 191 39.8
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 6.1e-21 105.1 129 52.7
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 3.0e-20 102.8 126 49.2
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 4.0e-20 102.4 116 50.9
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.0e-15 87.8 96 53.1
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 5.0e-15 85.5 84 58.3
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.1e-09 67.8 92 45.7
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 6.0e-08 62.0 156 27.6


User provided reference genes

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