Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 1.5e-150 537.3 614 100.0
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 2.8e-80 303.9 625 77.6
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 4.0e-79 300.1 609 79.0
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 2.6e-78 297.4 622 79.4
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 5.4e-76 289.7 566 83.4
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 1.6e-75 288.1 624 77.9
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 2.1e-75 287.7 615 80.2
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 3.5e-75 287.0 621 78.3
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 3.9e-74 283.5 551 84.0
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.3e-72 278.5 618 79.6
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.1e-72 277.7 618 77.8
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 1.4e-71 275.0 617 76.3
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.8e-71 274.6 619 77.9
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.8e-71 274.6 619 77.9
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 4.0e-71 273.5 617 76.2
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.5e-70 271.6 629 76.6
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 2.6e-70 270.8 563 81.9
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 7.6e-70 269.2 560 82.3
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 6.4e-69 266.2 618 76.4
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.1e-68 265.4 622 74.0
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.1e-68 265.4 632 72.9
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 3.2e-68 263.8 543 81.6
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 3.2e-68 263.8 614 78.3
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 5.4e-68 263.1 614 75.9
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 2.1e-67 261.2 614 78.3
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 3.5e-67 260.4 555 81.6
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 3.5e-67 260.4 621 76.0
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 6.0e-67 259.6 555 82.5
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 7.9e-67 259.2 547 82.3
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 7.9e-67 259.2 622 75.1
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 7.9e-67 259.2 620 76.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 1.0e-66 258.8 621 76.0
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 2.3e-66 257.7 551 82.0
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.9e-66 256.9 620 72.9
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 6.6e-66 256.1 620 57.7
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 3.1e-63 247.3 245 59.2
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 5.3e-63 246.5 615 74.0
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 6.9e-63 246.1 613 77.8
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 9.0e-63 245.7 616 74.7
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 9.0e-63 245.7 537 82.9
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 1.3e-61 241.9 616 72.7
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 1.7e-61 241.5 616 77.3
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 2.2e-61 241.1 621 74.9
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 2.9e-61 240.7 613 77.2
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 2.9e-61 240.7 489 92.8
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 8.4e-61 239.2 617 74.7
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 8.4e-61 239.2 598 65.1
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.1e-60 238.8 620 64.4
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 3.2e-60 237.3 551 82.6
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 1.6e-59 235.0 624 72.6
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.6e-59 235.0 560 82.0
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.1e-59 234.6 627 72.1
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 2.1e-59 234.6 617 77.1
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.8e-58 231.5 253 57.7
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 3.9e-58 230.3 171 70.2
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 6.7e-58 229.6 562 79.7
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 2.5e-57 227.6 617 73.7
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 3.3e-57 227.3 555 78.9
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 5.6e-57 226.5 243 56.4
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 9.6e-57 225.7 551 79.7
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 1.3e-56 225.3 553 81.9
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 1.6e-56 224.9 621 75.4
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.1e-56 224.6 266 54.5
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 2.1e-56 224.6 247 54.7
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 3.7e-56 223.8 545 79.8
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 8.1e-56 222.6 621 75.0
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 4.0e-55 220.3 624 75.6
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 3.4e-54 217.2 617 74.2
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 4.5e-54 216.9 617 76.3
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 1.0e-53 215.7 617 76.2
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.0e-53 215.7 617 76.2
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 2.2e-53 214.5 613 75.0
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 2.2e-53 214.5 613 75.0
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 2.2e-53 214.5 568 79.4
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 2.9e-53 214.2 621 75.4
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 4.9e-53 213.4 239 56.1
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 4.9e-53 213.4 560 77.1
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 1.4e-52 211.8 239 53.1
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 1.9e-52 211.5 240 53.8
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 1.9e-52 211.5 242 55.8
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 2.5e-52 211.1 558 77.4
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 3.2e-52 210.7 179 63.7
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 7.1e-52 209.5 269 52.4
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 2.7e-51 207.6 240 55.8
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 6.0e-51 206.5 615 64.2
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 1.3e-50 205.3 624 70.4
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.3e-50 205.3 254 53.1
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 3.0e-50 204.1 624 70.4
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 8.7e-50 202.6 552 76.6
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 2.5e-49 201.1 669 68.5
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 9.6e-49 199.1 471 90.0
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 1.3e-48 198.7 219 55.3
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 1.3e-48 198.7 562 66.7
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 1.8e-47 194.9 223 55.6
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 2.4e-47 194.5 570 75.1
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 1.5e-46 191.8 589 61.3
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 1.5e-46 191.8 165 63.6
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.7e-45 188.3 156 65.4
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 3.8e-45 187.2 223 53.8
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 1.3e-42 178.7 228 50.0
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 5.7e-41 173.3 124 69.4
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 3.7e-40 170.6 543 72.2
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 6.3e-40 169.9 123 68.3
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 4.1e-39 167.2 221 49.3
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 2.1e-35 154.8 549 74.0
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 3.6e-35 154.1 169 51.5
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 5.1e-34 150.2 121 62.0
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 2.2e-32 144.8 181 50.3
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.5e-30 138.7 192 47.4
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.5e-30 138.7 192 47.4
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 1.5e-30 138.7 598 68.4
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 3.8e-21 107.5 92 82.6
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.5e-20 104.8 162 42.6
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 6.1e-19 100.1 55 90.9
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 8.0e-19 99.8 549 69.4
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.1e-17 95.9 175 39.4
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 1.7e-16 92.0 64 70.3
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 1.6e-14 85.5 170 38.8
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 3.8e-13 80.9 229 32.8
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 2.5e-12 78.2 86 72.1
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 2.0e-09 68.6 62 53.2
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 5.4e-07 60.5 150 34.0
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 9.1e-07 59.7 87 64.4
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 3.5e-06 57.8 158 33.5
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 3.5e-06 57.8 158 33.5


User provided reference genes

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