Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 5.1e-77 291.2 168 100.0
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 2.7e-17 92.8 121 47.1
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 5.6e-15 85.1 121 40.5
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 9.5e-15 84.3 143 39.9
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 3.6e-14 82.4 128 41.4
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 1.0e-13 80.9 129 41.9
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 2.3e-13 79.7 132 43.9
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 2.3e-13 79.7 150 49.3
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.0e-13 79.3 145 38.6
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 3.0e-13 79.3 152 44.7
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 5.2e-13 78.6 113 43.4
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.5e-12 77.0 145 39.3
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 3.4e-12 75.9 128 39.1
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 3.4e-12 75.9 163 38.0
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.4e-12 75.9 145 37.2
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 3.4e-12 75.9 158 34.2
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 5.7e-12 75.1 112 55.4
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 7.5e-12 74.7 116 42.2
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 7.5e-12 74.7 116 40.5
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 7.5e-12 74.7 154 37.0
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 7.5e-12 74.7 141 37.6
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 1.7e-11 73.6 106 41.5
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 2.2e-11 73.2 137 38.0
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 2.9e-11 72.8 127 45.7
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 2.9e-11 72.8 121 45.5
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 2.9e-11 72.8 64 57.8
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 3.7e-11 72.4 127 41.7
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 3.7e-11 72.4 140 36.4
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 4.9e-11 72.0 61 57.4
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.9e-11 72.0 147 38.1
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.9e-11 72.0 147 38.1
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 4.9e-11 72.0 147 38.1
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 6.4e-11 71.6 116 43.1
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 8.3e-11 71.2 143 36.4
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.1e-10 70.9 97 40.2
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.1e-10 70.9 99 39.4
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 1.1e-10 70.9 97 40.2
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 1.8e-10 70.1 67 56.7
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 2.4e-10 69.7 60 55.0
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 2.4e-10 69.7 116 40.5
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 3.2e-10 69.3 102 44.1
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.4e-10 68.6 116 44.0
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 9.2e-10 67.8 101 44.6
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 9.2e-10 67.8 134 36.6
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.2e-09 67.4 70 55.7
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 1.2e-09 67.4 119 37.8
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 1.6e-09 67.0 58 56.9
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.6e-09 67.0 116 43.1
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 1.6e-09 67.0 113 41.6
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 1.6e-09 67.0 110 37.3
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 2.0e-09 66.6 124 37.1
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 2.0e-09 66.6 80 43.8
Manes.13G029400 Manihot esculenta HOM05D007558 ORTHO05D009245 2.7e-09 66.2 62 53.2
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 2.7e-09 66.2 70 51.4
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 4.6e-09 65.5 62 56.5
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.0e-08 64.3 90 44.4
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 1.3e-08 63.9 101 39.6
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.3e-08 63.9 104 41.3
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 1.7e-08 63.5 130 43.8
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 1.7e-08 63.5 143 33.6
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 2.3e-08 63.2 121 38.0
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 2.3e-08 63.2 59 49.2
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 2.3e-08 63.2 71 47.9
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 3.9e-08 62.4 98 40.8
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 3.9e-08 62.4 151 33.8
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 3.9e-08 62.4 58 53.4
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 5.0e-08 62.0 125 36.0
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 6.6e-08 61.6 130 42.3
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 1.1e-07 60.8 135 34.1
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 1.5e-07 60.5 126 36.5
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.9e-07 60.1 55 54.5
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 2.5e-07 59.7 137 33.6
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 3.3e-07 59.3 130 34.6
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 4.3e-07 58.9 117 34.2
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 7.3e-07 58.2 115 35.7
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 7.3e-07 58.2 40 62.5
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 9.5e-07 57.8 77 46.8
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 9.5e-07 57.8 36 66.7
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 9.5e-07 57.8 61 50.8
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 9.5e-07 57.8 79 41.8
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 1.2e-06 57.4 168 37.5
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.2e-06 57.4 58 48.3
Ah.02g129970 Amaranthus hybridus HOM05D023191 ORTHO05D009245 1.6e-06 57.0 43 55.8
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 1.6e-06 57.0 85 41.2
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 1.6e-06 57.0 56 50.0
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 2.1e-06 56.6 128 32.8
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 2.1e-06 56.6 135 32.6
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 2.8e-06 56.2 43 55.8
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 2.8e-06 56.2 36 63.9
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 2.8e-06 56.2 95 33.7
ATR0730G210 Amborella trichopoda HOM05D022024 ORTHO05D009245 3.6e-06 55.8 58 48.3
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 3.6e-06 55.8 107 32.7
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 3.6e-06 55.8 107 32.7
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 4.7e-06 55.5 78 43.6


User provided reference genes

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