Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 6.7e-34 146.7 72 100.0
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 6.7e-34 146.7 72 100.0
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 4.3e-33 144.1 72 95.8
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 7.4e-33 143.3 72 94.4
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 9.6e-33 142.9 72 95.8
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 9.6e-33 142.9 72 95.8
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 9.6e-33 142.9 72 95.8
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 9.6e-33 142.9 72 95.8
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 9.6e-33 142.9 72 95.8
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 9.6e-33 142.9 72 95.8
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.6e-32 142.1 72 95.8
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 2.8e-32 141.4 72 94.4
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 2.8e-32 141.4 72 95.8
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.0 72 93.1
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.0 72 93.1
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.0 72 93.1
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.0 72 93.1
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.0 72 93.1
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 6.2e-32 140.2 72 97.2
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 6.2e-32 140.2 72 97.2
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 6.2e-32 140.2 72 97.2
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 1.4e-31 139.0 72 91.7
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 1.4e-31 139.0 72 91.7
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.8e-31 138.7 70 95.7
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 1.8e-31 138.7 72 94.4
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-31 138.7 72 94.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-31 138.7 72 94.4
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-31 138.7 72 94.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-31 138.7 72 94.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-31 138.7 72 94.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-31 138.7 72 94.4
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 3.1e-31 137.9 72 93.1
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 6.9e-31 136.7 72 90.3
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 1.2e-30 136.0 72 94.4
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 1.2e-30 136.0 72 90.3
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.5e-30 135.6 72 90.3
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.0e-30 135.2 72 93.1
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 2.0e-30 135.2 72 93.1
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 2.0e-30 135.2 72 93.1
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 2.0e-30 135.2 72 93.1
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 3.4e-30 134.4 72 90.3
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 1.0e-29 132.9 72 91.7
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 1.3e-29 132.5 69 92.8
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 1.3e-29 132.5 72 90.3
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 1.7e-29 132.1 72 90.3
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 2.2e-29 131.7 69 92.8
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 2.9e-29 131.3 69 91.3
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 3.8e-29 131.0 72 91.7
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 3.8e-29 131.0 72 91.7
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 4.9e-29 130.6 72 88.9
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 6.5e-29 130.2 72 88.9
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 3.2e-28 127.9 69 88.4
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 4.2e-28 127.5 72 87.5
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 1.2e-27 125.9 69 89.9
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.6e-27 125.6 71 85.9
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.5e-27 124.4 72 84.7
Medtr4g451555 Medicago truncatula HOM05D000533 ORTHO05D002807 1.1e-25 119.4 71 85.9
BolC2t10599H Brassica oleracea HOM05D000533 ORTHO05D002807 2.5e-25 118.2 63 92.1
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 1.8e-23 112.1 60 91.7
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 2.6e-22 108.2 67 83.6
arahy.Tifrunner.gnm1.ann1.F0S3GF Arachis hypogaea HOM05D000533 ORTHO05D002807 3.4e-22 107.8 61 88.5
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 7.6e-22 106.7 56 92.9
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 1.3e-21 105.9 53 100.0
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-21 105.9 53 100.0
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 1.3e-21 105.9 62 87.1
Lalb_Chr07g0191801 Lupinus albus HOM05D000533 ORTHO05D002807 1.7e-21 105.5 61 88.5
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 4.6e-19 97.4 52 92.3
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 2.3e-18 95.1 72 70.8
Lsat_1_v5_gn_5_174020 Lactuca sativa HOM05D000533 ORTHO05D002807 2.3e-18 95.1 56 80.4
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 8.7e-18 93.2 47 97.9
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 1.9e-17 92.0 45 100.0
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.2e-16 88.6 72 63.9
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 1.8e-15 85.5 74 64.9
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 6.9e-15 83.6 72 59.7
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 6.9e-15 83.6 40 97.5
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 1.2e-14 82.8 72 58.3
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 2.0e-14 82.0 72 65.3
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 2.6e-14 81.6 74 62.2
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 5.0e-13 77.4 56 69.6
CSS0023353 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D006151 3.6e-11 71.2 71 56.3
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 4.6e-11 70.9 34 91.2
Nitab4.5_0001783g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.8e-10 68.9 44 77.3
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 3.0e-10 68.2 56 53.6
Duzib093G2216 Durio zibethinus HOM05D000533 ORTHO05D002807 3.3e-09 64.7 72 55.6
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 1.7e-08 62.4 54 63.0
Solyc02g011790.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 8.2e-08 60.1 68 51.5
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 2.4e-07 58.5 39 71.8
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 2.4e-07 58.5 39 71.8
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 2.4e-07 58.5 39 71.8
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 2.4e-07 58.5 39 71.8
EL10Ac6g13955 Beta vulgaris HOM05D000533 ORTHO05D002807 3.1e-07 58.2 28 92.9


User provided reference genes

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