Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 7.9e-172 607.1 316 100.0
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.9e-81 306.2 268 61.9
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 3.8e-81 305.8 315 54.6
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.4e-81 304.7 316 54.4
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.4e-80 303.1 200 75.0
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.4e-80 303.1 318 52.8
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 3.2e-80 302.8 199 74.9
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.7e-78 297.0 261 61.3
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.7e-78 297.0 299 55.2
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 2.3e-78 296.6 285 56.5
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 5.1e-78 295.4 306 54.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 6.6e-78 295.0 283 58.3
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 6.6e-78 295.0 246 63.4
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.5e-77 293.9 206 68.9
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.9e-77 293.5 291 58.4
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.3e-76 290.8 285 58.2
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.3e-76 290.8 251 60.2
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.1e-76 290.0 253 58.9
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 2.8e-76 289.7 325 54.8
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.8e-76 289.7 291 54.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 8.1e-76 288.1 236 64.0
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.4e-75 287.3 257 59.5
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 5.3e-75 285.4 291 54.0
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 6.9e-75 285.0 222 65.3
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 1.2e-74 284.3 267 56.9
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.0e-74 283.5 305 51.8
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 2.6e-74 283.1 313 49.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 3.4e-74 282.7 225 63.6
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 5.8e-74 282.0 258 57.8
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 9.9e-74 281.2 291 53.3
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 9.9e-74 281.2 313 49.2
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.2e-73 280.0 297 53.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 4.9e-73 278.9 252 57.5
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.1e-72 277.7 266 60.2
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.1e-72 277.7 263 55.9
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.1e-72 277.7 271 54.6
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.4e-72 276.6 270 53.7
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 3.2e-72 276.2 258 58.1
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 4.2e-72 275.8 257 56.0
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 5.4e-72 275.4 255 57.3
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.2e-71 274.2 259 54.4
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.2e-71 274.2 259 54.4
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.7e-71 273.1 253 57.7
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 3.5e-71 272.7 296 53.7
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 4.6e-71 272.3 283 52.3
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 6.0e-71 271.9 274 56.6
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 7.9e-71 271.6 258 55.0
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 7.9e-71 271.6 265 54.7
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.0e-70 271.2 260 58.1
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.3e-70 270.8 257 54.9
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.3e-70 270.8 193 67.9
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-70 270.4 257 54.9
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 2.3e-70 270.0 209 67.0
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 3.0e-70 269.6 252 57.5
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 3.0e-70 269.6 209 63.6
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 3.9e-70 269.2 209 63.2
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 5.1e-70 268.9 282 53.9
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 6.7e-70 268.5 254 56.7
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 8.7e-70 268.1 259 56.4
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.1e-69 267.7 227 63.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.5e-69 267.3 253 55.3
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.5e-69 267.3 260 56.9
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.8e-68 263.1 310 52.6
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 3.7e-68 262.7 305 52.5
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 2.6e-66 256.5 254 57.5
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.9e-64 250.4 248 53.6
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 9.3e-64 248.1 335 45.4
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.2e-63 247.7 265 52.8
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 1.6e-63 247.3 283 49.1
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.7e-63 246.5 244 55.3
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 3.3e-61 239.6 299 49.5
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.3e-60 237.7 260 54.6
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.8e-60 236.5 267 50.6
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.8e-60 236.5 233 49.8
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 6.9e-59 231.9 256 54.3
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.2e-58 231.1 269 49.8
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.5e-58 230.7 284 51.4
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 5.0e-57 225.7 260 53.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 7.1e-56 221.9 329 46.8
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 4.6e-55 219.2 147 70.1
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.5e-53 214.2 335 42.1
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 9.7e-53 211.5 215 54.9
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.6e-52 210.7 217 55.8
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 8.2e-52 208.4 217 54.4
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 8.2e-52 208.4 273 45.1
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.4e-51 206.8 267 47.6
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.7e-44 184.1 213 43.7
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 9.1e-43 178.3 257 38.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.6e-39 167.5 282 38.3
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.8e-35 154.1 251 39.0
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.7e-33 147.5 191 48.7
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.2e-33 147.1 96 68.8
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.3e-30 137.1 158 52.5
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 2.6e-29 133.7 117 58.1
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 1.8e-27 127.5 194 35.6
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 3.1e-27 126.7 176 41.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 4.7e-23 112.8 124 51.6
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 6.1e-23 112.5 145 38.6
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 2.3e-22 110.5 148 47.3
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.2e-17 94.0 117 38.5
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 5.5e-16 89.4 62 62.9
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 5.5e-16 89.4 90 52.2
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 7.2e-16 89.0 139 42.4
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 4.1e-11 73.2 157 33.8


User provided reference genes

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