Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 6.3e-188 660.6 332 100.0
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 1.3e-100 370.5 290 63.8
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 2.3e-97 359.8 257 70.8
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 3.0e-97 359.4 263 66.5
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 8.8e-97 357.8 259 69.5
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 2.0e-96 356.7 268 63.8
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 2.6e-96 356.3 257 68.9
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 4.4e-96 355.5 254 70.9
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 9.7e-96 354.4 267 64.4
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 1.3e-95 354.0 253 67.6
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 2.2e-95 353.2 329 57.1
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 4.8e-95 352.1 286 64.0
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 1.4e-94 350.5 256 66.8
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 2.4e-94 349.7 257 66.9
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 3.1e-94 349.4 340 56.5
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 1.5e-93 347.1 258 67.8
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 1.5e-93 347.1 295 57.3
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 1.5e-93 347.1 329 56.8
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 1.5e-93 347.1 259 68.0
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 2.0e-93 346.7 258 66.7
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 2.6e-93 346.3 257 66.5
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 3.4e-93 345.9 286 61.9
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 5.9e-93 345.1 258 66.7
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 1.4e-91 340.5 287 61.7
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 3.2e-91 339.3 275 62.9
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 5.5e-91 338.6 258 63.2
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 7.2e-91 338.2 275 62.9
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.6e-90 337.0 259 64.9
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 1.6e-90 337.0 256 64.8
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 1.6e-90 337.0 259 64.9
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 1.6e-90 337.0 311 59.5
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 2.7e-90 336.3 259 64.9
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 8.0e-90 334.7 281 61.9
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 8.0e-90 334.7 257 63.4
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 1.0e-89 334.3 277 60.3
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.4e-89 334.0 259 63.7
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.8e-89 333.6 258 64.3
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.9e-89 332.4 287 58.2
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 6.7e-89 331.6 314 55.4
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 1.5e-88 330.5 314 55.4
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 1.5e-88 330.5 291 58.8
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 9.7e-88 327.8 258 62.4
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 1.3e-87 327.4 329 54.4
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.7e-87 327.0 257 62.6
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 4.8e-87 325.5 265 60.8
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 6.3e-87 325.1 281 61.2
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 6.3e-87 325.1 242 66.9
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 1.4e-86 323.9 346 51.2
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 1.4e-86 323.9 322 52.5
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 2.4e-86 323.2 275 61.1
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 2.4e-86 323.2 257 62.3
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 2.4e-86 323.2 314 56.1
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 2.6e-85 319.7 266 62.0
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 2.6e-85 319.7 323 54.5
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 5.9e-85 318.5 257 61.9
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 5.9e-85 318.5 257 61.9
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 5.9e-85 318.5 277 59.9
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 7.7e-85 318.2 260 62.7
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 1.3e-84 317.4 249 64.3
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 1.3e-84 317.4 222 69.4
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 3.8e-84 315.8 266 59.4
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 6.5e-84 315.1 298 55.4
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 1.1e-83 314.3 260 60.0
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 2.7e-82 309.7 263 59.7
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 3.6e-82 309.3 394 48.0
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 1.4e-81 307.4 259 59.1
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 6.7e-81 305.1 334 51.8
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 1.5e-80 303.9 222 68.0
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 2.2e-79 300.1 223 65.0
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 4.8e-79 298.9 223 64.6
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 4.8e-79 298.9 217 66.4
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.1e-78 297.7 222 63.5
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.1e-78 295.8 284 52.8
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 5.3e-78 295.4 258 58.1
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 5.3e-78 295.4 258 59.3
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 9.1e-78 294.7 222 68.5
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.7e-77 293.1 283 53.7
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 5.9e-77 292.0 257 55.3
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 1.0e-76 291.2 262 55.0
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 1.0e-76 291.2 326 51.5
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 5.0e-76 288.9 281 52.7
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.1e-75 287.7 287 51.9
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 2.5e-75 286.6 282 51.4
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 3.2e-75 286.2 278 51.1
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 9.4e-75 284.6 417 43.4
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 1.6e-74 283.9 268 54.5
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 4.0e-73 279.3 258 53.9
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 4.0e-73 279.3 260 55.4
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 5.2e-73 278.9 297 50.5
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 6.8e-73 278.5 294 48.6
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 1.2e-72 277.7 259 54.8
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.5e-72 277.3 257 53.3
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 4.4e-72 275.8 303 48.2
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 7.5e-72 275.0 283 50.9
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 9.8e-72 274.6 294 50.0
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 1.7e-71 273.9 259 53.3
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 1.7e-71 273.9 259 53.3
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 2.2e-71 273.5 282 50.4
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.2e-71 273.5 258 57.4
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 2.8e-71 273.1 259 53.3
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 2.8e-71 273.1 263 52.9
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.8e-71 272.3 275 51.3
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 4.8e-71 272.3 287 51.6
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 6.3e-71 271.9 263 52.5
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 8.3e-71 271.6 280 50.4
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 1.4e-70 270.8 263 52.1
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 1.4e-70 270.8 263 52.1
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.4e-70 270.8 254 54.3
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.4e-70 270.0 223 60.1
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 4.1e-70 269.2 256 53.1
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 5.4e-70 268.9 283 49.5
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 5.4e-70 268.9 289 48.4
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 7.0e-70 268.5 257 52.9
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 3.5e-69 266.2 233 55.8
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.3e-68 264.2 232 54.3
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 3.3e-67 259.6 192 66.1
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 1.6e-66 257.3 225 56.4
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 3.6e-66 256.1 192 65.1
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 6.1e-66 255.4 226 59.3
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 5.2e-65 252.3 300 47.0
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 6.8e-65 251.9 217 59.9
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 5.4e-62 242.3 281 48.8
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 9.2e-62 241.5 264 48.5
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 3.8e-60 236.1 221 54.3
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 4.7e-58 229.2 200 56.5
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 4.4e-56 222.6 215 54.0
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 4.4e-56 222.6 215 54.0
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 5.8e-56 222.2 225 52.9
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 7.5e-56 221.9 215 54.9
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 9.8e-56 221.5 215 54.4
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 9.8e-56 221.5 215 54.9
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 1.7e-55 220.7 214 54.7
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 4.9e-55 219.2 215 52.6
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.2e-54 216.5 215 54.0
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 2.0e-53 213.8 201 57.2
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.7e-52 210.7 198 56.6
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 8.6e-52 208.4 275 44.7
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.1e-49 199.9 156 63.5
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 4.0e-49 199.5 230 49.6
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 1.4e-46 191.0 168 60.1
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 1.2e-45 188.0 213 45.1
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 4.6e-45 186.0 195 54.9
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.7e-44 184.1 234 47.4
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 8.1e-42 175.3 136 64.7
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 2.3e-41 173.7 166 52.4
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 2.2e-39 167.2 124 63.7
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.3e-36 157.9 140 54.3
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 3.3e-35 153.3 278 39.6
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 9.5e-35 151.8 126 61.9
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 2.1e-34 150.6 131 57.3
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 2.1e-34 150.6 131 58.0
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 1.8e-33 147.5 234 38.0
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 1.5e-32 144.4 286 36.0
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 5.8e-32 142.5 123 58.5
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 2.2e-31 140.6 131 56.5
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 2.4e-30 137.1 170 45.9
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 1.6e-29 134.4 136 49.3
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 7.3e-27 125.6 187 37.4
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 2.4e-25 120.6 197 37.1
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 4.0e-25 119.8 251 32.7
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.6e-24 117.1 83 66.3
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 6.4e-23 112.5 76 65.8
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 1.5e-19 101.3 87 57.5
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 3.3e-19 100.1 84 53.6
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 2.0e-16 90.9 85 57.6
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 2.4e-14 84.0 105 46.7
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 1.0e-12 78.6 173 38.2
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.5e-11 74.7 265 27.5
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 1.1e-09 68.6 152 31.6
TPR.G39184 Trifolium pratense HOM05D001860 ORTHO05D004922 6.9e-09 65.9 59 47.5
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 6.9e-09 65.9 75 53.3
AagrBONN_evm.TU.Sc2ySwM_368.1265 Anthoceros agrestis HOM05D019459 ORTHO05D019626 1.5e-08 64.7 181 32.6
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 9.9e-08 62.0 164 31.1
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 2.9e-07 60.5 59 45.8
Mapoly0068s0103 Marchantia polymorpha HOM05D019459 ORTHO05D019626 7.1e-06 55.8 177 27.1


User provided reference genes

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